Gene Rmet_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0215 
Symbol 
ID4037001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp228774 
End bp229715 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID637975588 
ProductABC transporter-related protein 
Protein accessionYP_582370 
Protein GI94309160 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA CCCAGACAGC GTGGCAAGGC GGCATGGCCC GCGTGGACGC CACAGGCACG 
TTGGTGCCGC CGGGCGCGAT TGCCCCGGCC GGGCACGTGG AGGGCACGCA CGGCGACAGC
CCGCGCCCCG GCAGTGCGCG TGAGCCAGAG TCGACGTCCC ACGTTCGCAC GCGCGGCGAC
GTGATTCTCG ATCTGCAGAA CATCTCGCTG TCGTTCGGCG GCGTGAAGGC GCTGACCGAT
ATCTCGTTCG ACGTCTGCGA GCACGAGATC CGCGCAATCA TCGGCCCGAA CGGCGCGGGC
AAGAGTTCGA TGCTGAATGT GATCAACGGC GTCTATCACC CGCAGCAGGG CCGCATCGTG
TTTCGAGGCC AGGAGCGTCG CCAGATGCAT CCCACGGCTG CTGCGCGCCA GGGCATCGCA
CGGACGTTCC AGAACATCGC GCTGTTCAAG GGCATGACCG TGCTGGACAA CATCATGACC
GGCCGCAACA CGCAGTTCCG CACGGGCGTG TTCGCCCACG CGCTCTGGTG GGGGCCGGCC
CGCGCCGAAG AGATGCGTCA TCGCCGCAAG GTCGAGGAGG TGATCGACTT CCTCGAGATC
CAGGCGATCC GCAAGACACC GGTCGGCAGG CTGCCTTACG GCCTGCAGAA GCGCGTGGAA
CTGGCGCGCG CGCTGGCTGC GGAACCGTCG ATGCTGTTGC TCGATGAACC GATGGCGGGC
ATGAACGTGG AAGAGAAGCA GGACATGTGC CGTTTCATCC TGGACGTGAA CCATCAGTTC
GGCACCACCA TCGTGCTGAT CGAGCACGAC ATGGGCGTGG TGATGGATAT CTCCGACCGC
GTGGTGGTAC TCGACTACGG CAAGAAGATC GGCGATGGCA CGCCCGATGA GGTCAAGTCG
AACCCGGACG TGATTCGCGC ATACCTCGGC ACGGCGCACT GA
 
Protein sequence
MTVTQTAWQG GMARVDATGT LVPPGAIAPA GHVEGTHGDS PRPGSAREPE STSHVRTRGD 
VILDLQNISL SFGGVKALTD ISFDVCEHEI RAIIGPNGAG KSSMLNVING VYHPQQGRIV
FRGQERRQMH PTAAARQGIA RTFQNIALFK GMTVLDNIMT GRNTQFRTGV FAHALWWGPA
RAEEMRHRRK VEEVIDFLEI QAIRKTPVGR LPYGLQKRVE LARALAAEPS MLLLDEPMAG
MNVEEKQDMC RFILDVNHQF GTTIVLIEHD MGVVMDISDR VVVLDYGKKI GDGTPDEVKS
NPDVIRAYLG TAH