Gene Rmet_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0212 
Symbol 
ID4036998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp224897 
End bp225751 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content62% 
IMG OID637975585 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_582367 
Protein GI94309157 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA AGACAGTGGG CATCGTTGGT GCCGGCACGA TGGGTAACGG CATTGCGCAG 
GCCTGCGCGG TGGTCGGCAT CGACGTGGTG ATGATCGACA TCAGCGACGC CGCCGTCCAG
AAGGGCATCG CCACCGTGGC CGGCAGCCTC GACCGTCTGA TCAAGAAGGA AAAGGCCACC
GAGGCGGACA AGGCCGCGGC GCTGGCACGT ATCCACGGCA GCACGTCGTA CGACGATCTG
AAGCGCGCCG ACATCGTGAT CGAGGCGGCC ACCGAAAACT TCGACCTGAA GGTCAAGATC
CTGAAGCAGA TCGATGGCAT CGTCGGCCCC GACGTGATCG TTGCATCGAA CACCTCGTCG
ATCTCGATCA CCAAGCTGGC CGCTGTAACG TCGCGCGCGG ACCGCTTTAT CGGCATGCAC
TTCTTCAACC CGGTGCCGAT GATGGCGTTG GTCGAACTGA TTCGTGGCCT GCAGACCAGC
GATGCCGCGC ACGCCGACGT CGAGGACCTC GCCAAGCGTC TGGGCAAGTA CCCGATCACG
GTCAAGAACA GCCCGGGTTT CGTGGTCAAC CGCATTCTCT GCCCGATGAT CAACGAAGCG
TTCTGCGTGC TCGGTGAAGG CCTGGCCTCG CCCGAGGAAA TCGACGAAGG CATGAAGCTC
GGCTGCAATC ATCCGATCGG TCCGCTGGCG CTGGCCGACA TGATCGGTCT GGACACGATG
CTTGCCGTCA TGGAAGTGCT CTACACCGAG TTCGCCGATC CGAAGTACCG TCCGGCCATG
CTGATGCGCG AAATGGTGGC CGCAGGCTAT CTGGGCCGCA AGACGGGCCG TGGCGTGTAC
GTGTACAGCA AGTAA
 
Protein sequence
MAIKTVGIVG AGTMGNGIAQ ACAVVGIDVV MIDISDAAVQ KGIATVAGSL DRLIKKEKAT 
EADKAAALAR IHGSTSYDDL KRADIVIEAA TENFDLKVKI LKQIDGIVGP DVIVASNTSS
ISITKLAAVT SRADRFIGMH FFNPVPMMAL VELIRGLQTS DAAHADVEDL AKRLGKYPIT
VKNSPGFVVN RILCPMINEA FCVLGEGLAS PEEIDEGMKL GCNHPIGPLA LADMIGLDTM
LAVMEVLYTE FADPKYRPAM LMREMVAAGY LGRKTGRGVY VYSK