| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0193 |
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| Symbol | |
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| ID | 4036978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 202083 |
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| End bp | 202526 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637975565 |
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| Product | pilus assembly protein PilE |
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| Protein accession | YP_582348 |
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| Protein GI | 94309138 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.648056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCGTC GACCAAAACA TTCCGCGGGC TTTTCGCTTG TCGAACTCAT GATCGTCGCG
ATAATCGTCG CGATCCTGGC GGCTATCGCA TTCCCTTCGT ACATGCAGCA TGTGCGCAAG
TCACGTCGAA CCGATGCCAA GACGGCGTTG CTCGATGCTG CGGCAAGGCA GGAGAAGGTC
TTTAGTACGC AAAACCTGTA CGGTGGCGCC CCGGGCGATC TGGGCTACGC GGGCGCCGCG
TATCCGGTGC AGATTCAATC GAGCGGACAA ACGTTCTATC AGCTCACCGT TGCCACAGCC
AACTCGGGTA CGACGTACAC GGCCACGGCC GCGCCGGTCG GCGCGCAGGC CGGGGATGAC
TGCGGCTCGT ATGTCATCAA CAATCTGGGC GTGCAGTCCA ACACCGGGAC GTCCAACGGG
GCCACGTCCG CCACCTGCTG GTAG
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| Protein sequence | MNRRPKHSAG FSLVELMIVA IIVAILAAIA FPSYMQHVRK SRRTDAKTAL LDAAARQEKV
FSTQNLYGGA PGDLGYAGAA YPVQIQSSGQ TFYQLTVATA NSGTTYTATA APVGAQAGDD
CGSYVINNLG VQSNTGTSNG ATSATCW
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