| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0192 |
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| Symbol | |
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| ID | 4036977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 198697 |
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| End bp | 202080 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637975564 |
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| Product | putative type-4 fimbrial biogenesis pily1-related protein |
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| Protein accession | YP_582347 |
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| Protein GI | 94309137 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.48482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAA ATCCTCCACG TCTCGCATTG GTGGCCTCGG CCGTGGCGGC GCTGCTTGCT
GCGCAGGCTC GCGCGGTTGT GATTCAGGAC AATCTGAATG GGGCATCGTC CAGCTATCCA
TGGACCGCAA TCAATGGTGC CTGCCTGACC GCTGGCGATG GCTCGGGGAC GATCCCTGGA
TGCACGGCAT CAAGCTTTAC GTACTACTCG AGCAAGAGTT CGAAGCTCGT GGGCGGCGTG
ACAGGAACGC TTCCAGATAC GGCTGGCTCC GGCGCGCTTC GGTTGACCAA TGGTGACACG
GGTAAGGGTT CGAACGGGAA CAGCCAGAAC GGCGCTGTCG TATCGAACTT CACCTTCCCG
ATGCAGGAGG GCTTGCAGGT TACGTTCTCC ACCGTGACCT ATGGCGGCAA TGCATTCGGC
AATACCGGTG CCGACGGCAT CAGCTTCTTC CTTGCCGACG GCAATCAGGC CGCGAGCGTC
GGGGCGCTGG GTGGCAGCCT GGGATATAGC TGCTCCAACG TGAACGCTGT CTATGACGGG
GTGGTTGCCG GTTACATCGG GATCGGCATC GACGAGTATG GCAACTTCTC CAATGGGAGT
TCCGGTGGCT CCAAGAATGA CAACACCAGC ACTGGACCGG GTTTCAAGGC GAACCGGATC
AGTATTCGTG GCTCGGGGAA TACGAACTGG GCAAATCTGC TGGCGACCTA CAACTCGTAC
TACAAGAAGG TCCCCACATC GAAGATTCCT ACTGCGGTGC AGAACACGTG CGCTGCAGGA
TATGTACAAG ACTGGTCGAG TGGCAAGGAC AATGGCTCGG TAACAAGCAA GCCACTGGCC
TACAACTACA ACTTCATTGC ATCGAGCGAT CTGCCGAACG CGATCGCGAA CCAGCAGGCC
ACAGCCACGC CAACCCGTGG CAAGGCCATC CCGATCGTCT ACTCGCTCAA GCTCACGCAA
AACGGACTGC TGAGCATGTC GTACAGCTAT AACGGCGGTG CGGCCACGCC AATCATCACG
AACCAGGACA TCACGAAGTC GAACGGACCG GTGCCGACCC AGTTCCGTTT CGGGTTTGCC
GCTGGCACCG GTAGCGGTAG CAACGTTCAT GAGATTACCT GTTTCAAGGC GGAGCCTGTT
GGTCAGTCAA GCAGTTCGGC AGGCACCAAC GTGCAGCAGT CCGCGCGCGT GGAAGCTGGA
TCGCAGGTGT ACCTGGCCTA CTACCATCCG ACCAACTGGT GGGGAGAGCT GAGCGCGCAG
AACCTGCTCT ACGACGCTTC GAGCGACACG GTCTCGATGA GCACCACCGC CAACTGGAAT
GCAAGTTGCG TGCTGACCGG TGGAAGCTGC CCGTCCACTG GCGGCACCAA CACCGCGCAA
TCTCCGACCG CGCGAAAGAT CCTCACCTGG AGTGGCTCGA CTGGCATCCC CTTCCGCTGG
GATAGCACCT ATACGCCGCC AGCTGCCGTG CAGACACTCA TGACCGCGGG CGACGCCAGT
GCGACCAACA AGCGCCTGAA CTATCTGCGC GGCGACCGTA CCAACGAGAT CACGACATCA
GGAACGGGTT TGTATCGCGC ACGCACGGGC GTGCTGGGCG ACATCATGGA TTCAAGTCCG
ACCTGGGTGG GGGCGCCTTC CTCGCCCTAC AGCGGGCCCT GGACGGACGC CCTGTACAAG
ACCGCCACCG CTGCAGAGCC AAAAGGCAGC TATGACACGT TCAAGCAGAA CAACGCGCTG
CGCCAGAATA TCGTCTACGT CGGGGCCAAC GATGGTCTGC TGCACGGCTT CCGTTCCGGC
TACTACGACG CGGGCGGAAA CTTCGTCGGC AGCGATGCCA GCAAGCCGAA TGACGGGAGC
GAGGCGATCG CTTACATGCC GGGCGCCGTG CTGAAGACGA TCCATTCCTC GACCAGTGCG
CTGGACCTCG CCTCGGCGCA GTATGTGCAC AACTACTTCG TGGATGCGAC GCCAGGCACG
GGCGATCTCT ACTATCAGAA TGCCTGGCAT ACGTGGCTGG TTGGAGGCCT CGGTCCCGGC
GCGAACGCAA CCGGGCCGAT CGGCGACAAG ACGACGACGG GTACGGGTGG TGCCATCTAC
GCGCTCGATG TCACGAACCC TGCCGGGTTT GCCGATGACG CCGCAACGGC AAGCAGCCTG
GTAATCGGCG AGTGGGACAA CACGCTGAAA TGCACCGGTA ATACCGGCTG TGGCACGAAC
CTTGGAAACA CCTACGGCAC ACCGGTGATT CGCCGCCTGC ACAACGGCAA CTGGGCGGTG
CTGTTCGGCA ACGGCCTGAA CAGCGCATCC GGCTCGGCGG GACTGTATGT GATGCTGGTC
AACCCGGCGG ACGGCTCAAA GTCGTTCCTG TACCTGGATA CGGGATACGG TCCGGCCAAG
GATCCGGCCG GCAAGAATTC CAAGAATGGC ATTGCCTATG TGACACCCGC GGATCTCGAT
GGCGACCACA TTACCGACTA CGTCTATGCC GGCGATATGT TCGGCAATGT CTGGCGTTTT
GACCTGACTT CGAACACGCC TGCCAACTGG AGTGCGTCGG CCAAGCCGCT GCTGGCCACC
GGGCTCCCCA TTACCAGCAA GGTTGCCGTG GCTGCCGTGC CCGGCAGCGG CACCGGGGCC
AATGCGATAC CGCGTGTCAT GGTCAGCTTC GGCACCGGTC GTCGCCTGGA ACAGACGCAG
AGCAGCGAAG CTGTGTTCGA GAGCGCCACC CAGTCACTTT TCGGTGTGTG GGACTGGAAC
ATGACGGCAT GGAACGGCGT GGCCCCGGCC AGCGCGAAGT ATGCGGCGTT GGCAACCGCG
CCGCAGCCGC TGGCAATCGC CAACCTTACG GCGCAGTCGA TCACCAACGA AGGCCGCGCC
AGTTCGAATA CCGCGATGTT GCGCACGGTC AGCGCCACCG CCGTCTGCTG GCAGGGCAGT
ACCGTTTGCT CCAGTGGCAA CACCAAGTAT GGCTGGCAAT TGCCGCTGTC CACGAATCCT
GGCGAACAGG TGATCTACAA CCCCGTGATC GCATACGGAA TGTTCATCGT CAATACGACG
ATCCCACCGA GTTCGGCGGC TGCGCAGGCG CTCTCCTGCA ATACGGAGGT GCCTACTGGA
TTCACGATGG GGGTTTCCAT GGCCACTGGC GGCGCGGCAT CCCAATCCTT CTTCAGTACT
GCCAACAGCA ACACATTCCC GCTGCTTAAT GGCGGAATCG TCAGCGGCAT TGGCCTGAGC
GGTACGGGCT CCCCGTCGAT CGTGACAGCG CAGAAGAGAC CGTACATCGT GCAGCAGACG
GTTGGGGGCA CGGGCGTCGT TACCCAGATC AACCCCGGTG CCAATGCCAC GGGATCACGC
ATCAACTGGA TCAAGTTGCG CTAA
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| Protein sequence | MMRNPPRLAL VASAVAALLA AQARAVVIQD NLNGASSSYP WTAINGACLT AGDGSGTIPG
CTASSFTYYS SKSSKLVGGV TGTLPDTAGS GALRLTNGDT GKGSNGNSQN GAVVSNFTFP
MQEGLQVTFS TVTYGGNAFG NTGADGISFF LADGNQAASV GALGGSLGYS CSNVNAVYDG
VVAGYIGIGI DEYGNFSNGS SGGSKNDNTS TGPGFKANRI SIRGSGNTNW ANLLATYNSY
YKKVPTSKIP TAVQNTCAAG YVQDWSSGKD NGSVTSKPLA YNYNFIASSD LPNAIANQQA
TATPTRGKAI PIVYSLKLTQ NGLLSMSYSY NGGAATPIIT NQDITKSNGP VPTQFRFGFA
AGTGSGSNVH EITCFKAEPV GQSSSSAGTN VQQSARVEAG SQVYLAYYHP TNWWGELSAQ
NLLYDASSDT VSMSTTANWN ASCVLTGGSC PSTGGTNTAQ SPTARKILTW SGSTGIPFRW
DSTYTPPAAV QTLMTAGDAS ATNKRLNYLR GDRTNEITTS GTGLYRARTG VLGDIMDSSP
TWVGAPSSPY SGPWTDALYK TATAAEPKGS YDTFKQNNAL RQNIVYVGAN DGLLHGFRSG
YYDAGGNFVG SDASKPNDGS EAIAYMPGAV LKTIHSSTSA LDLASAQYVH NYFVDATPGT
GDLYYQNAWH TWLVGGLGPG ANATGPIGDK TTTGTGGAIY ALDVTNPAGF ADDAATASSL
VIGEWDNTLK CTGNTGCGTN LGNTYGTPVI RRLHNGNWAV LFGNGLNSAS GSAGLYVMLV
NPADGSKSFL YLDTGYGPAK DPAGKNSKNG IAYVTPADLD GDHITDYVYA GDMFGNVWRF
DLTSNTPANW SASAKPLLAT GLPITSKVAV AAVPGSGTGA NAIPRVMVSF GTGRRLEQTQ
SSEAVFESAT QSLFGVWDWN MTAWNGVAPA SAKYAALATA PQPLAIANLT AQSITNEGRA
SSNTAMLRTV SATAVCWQGS TVCSSGNTKY GWQLPLSTNP GEQVIYNPVI AYGMFIVNTT
IPPSSAAAQA LSCNTEVPTG FTMGVSMATG GAASQSFFST ANSNTFPLLN GGIVSGIGLS
GTGSPSIVTA QKRPYIVQQT VGGTGVVTQI NPGANATGSR INWIKLR
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