| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0188 |
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| Symbol | |
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| ID | 4036973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 196166 |
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| End bp | 196834 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975560 |
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| Product | pilus assembly protein |
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| Protein accession | YP_582343 |
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| Protein GI | 94309133 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.323266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCC TTCCTCACGC TCGGCTGACC GGGCGTGGAG GGCGCGCGTT GGCAGTCCGC
ATCGAGGATG CGGATGTCGA TGGCGTGCGC GCTTCACGTG CCAACCGGAA GCCTTCTCTC
CGTACCGTAT CGGGATCGGC TGGTCTGACG CTGATCGAGA TGGCGGTGAC GGTTGCTATC
GTTGCCATCG TGGCGGCCAT CAGCACGCCG TCGTTCCTCT CCTTCATCCA GTCCAATCGC
GTCCAGAGCG AGGTGAACTC GATGGTGAAC TCACTGCAGT TAGCGCGCAG TGAAGCCATC
AAGCGCGGCC AGTCGGTCAG CATTTGTCCG TCCAGCAATG GTTCCAGTTG CCTGGGCGCC
AATACCTGGA ATGTCGGCTG GCTCGTGTTC GTGGATCGCA ATGCCGATGG TGTTGTCGAC
ACGCCCGCGA ACGCGGCGGA TCTTCTGCAG TATCGGGCAC CCTGGGCCGG TACCGATACG
TTCGTGGCCA CACCGACCGC GACATTCGTG ACCTACAACC GCGATGGTTT CGGGGTCAAT
CTGCCGGGAG GCGCCGTGAC ACTCGCGGCA CAGACCCGTC CAGTTTCGGC TCAGGCCACG
CGCTGCATCG CGCTCAACAT GGTTGGCCGG CAGACCGTGC AGCAATCGGG GGTGGGCGCA
TGCAACTGA
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| Protein sequence | MARLPHARLT GRGGRALAVR IEDADVDGVR ASRANRKPSL RTVSGSAGLT LIEMAVTVAI
VAIVAAISTP SFLSFIQSNR VQSEVNSMVN SLQLARSEAI KRGQSVSICP SSNGSSCLGA
NTWNVGWLVF VDRNADGVVD TPANAADLLQ YRAPWAGTDT FVATPTATFV TYNRDGFGVN
LPGGAVTLAA QTRPVSAQAT RCIALNMVGR QTVQQSGVGA CN
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