| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0187 |
|---|
| Symbol | |
|---|
| ID | 4036972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 193852 |
|---|
| End bp | 195690 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637975559 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_582342 |
|---|
| Protein GI | 94309132 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.225052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCA TCGTTGGGGC GGTCTCTCAC CGCAATATCG TTCCTGTCCT GATCGAAGGC
CTGCGCCGCC TTGAGTACCG TGGCTACGAT TCCTGCGGCG TGGCCGTGGT GCGTGACGGT
ATTCTCGAGC GCGCCCGTAC CGTATCGCGC GTGGCCGAAC TGGACGCGCA GACGCAATCG
TCTGGCCTGG CCGGCCACAT CGGCATCGCG CACACGCGCT GGGCGACGCA CGGCAAGCCG
GACACCGTCA ACGCCCACCC GCACTTCTCG GACGAGACCA TCGCGCTCGT TCACAACGGC
ATCATCGAGA ACTACGAGCC GCTGCGCGAC GAACTGCGCG CGGTCGGGTA CGGTTTCGAA
TCGCAGACTG ATACTGAAGT GGTGGCGCAC CTGATCCACC AGGCTTACAC GTACCCGAGC
AGCGCCACGC GAGGCGACCT GTTCGGCGCG GTGCGCGCGG TCACCAAGCG CCTGCATGGC
GCCTACGCGA TCGCCGTGGT GGCCAAGGAC CAGCCGGACG TGGTGGTCGG CGCGCGCGCC
GGCTCGCCGC TGGTGGTGGC ACTGGGCGAG GACGAATCGT TCCTGGCCTC TGACGCGCTG
GCCGTGGCCG GCACCGCCAA CCGCATCATC TATCTGGAAG AGGGCGACGT GGTCGAGATC
TCGCGCGGTG GCGCGCGGAT TCGCGACGTG CACGATCACG AGGTCGAGCG CGAAGCGCGC
GTGGTGGAAG CCCACGCCGC CGCGGTGGAA CTGGGCCCGT ACCGGCACTT CATGCAGAAG
GAAATCTTCG AGCAGCCGCG CGCGCTGGGC GACACGCTGG AAGGCATCTC CGCGATCACG
CCCGAGCTGT TCGGTGAGAA CGCCGCGCAG GTGTTCTCGG AAATCGACAG TGTGCTGATC
CTGGCCTGCG GCACGAGCTA CTACTCGGGC TGCACGGCCA AGTACTGGCT CGAATCGATC
GCGAAGATCC CGACCCAGGT GGAAGTGGCC AGCGAATACC GCTATCGCGA CACCGTGCCG
AACCCGCGCG CGCTGGTGGT GGTGATTTCG CAGTCGGGCG AGACGGCCGA CACGATGGCC
GCGCTGCGTC ATGCCCGCTC ACTGGGCCAC ACGCACACGC TGGCCGTCTG CAACGTGGCG
ACGAGCGCCA TGGTGCGTGA GACCGAGCTG AGCTTCCTGA CACGCGCCGG TACCGAGATC
GGCGTGGCGT CGACCAAGGC CTTCACGACA CAACTGGCCG CGCTGTACAT GCTGACGCTG
GCGCTGGCCA AGGTGCGCGG CTACCTGACC GATGCGCAGG AAGCCGAAGC CCTGACCAAC
CTCCGCCACC TGCCGGCCGC GCTGCATGGC GTGCTGGCGC TGGAGCCGCA GATCATCGCG
TGGTCGGAAG ACTTCGCGCG CCGCGAGAAC GCGCTGTTCC TGGGGCGCGG CCTGCATTAC
CCGATCGCCC TGGAAGGCGC GCTCAAGCTC AAGGAAATCT CGTACATCCA CGCTGAAGCC
TATCCGGCCG GCGAACTCAA GCACGGCCCG CTGGCGCTCG TGACCGAGGC GATGCCGGTG
GTGACCGTAG CGCCGAACGA CGCGCTGCTG GAGAAGCTGA AGTCGAACAT CCAGGAAGTG
CGCGCCCGCG GTGGCCGTCT CTATGTGTTC GCCGACTCGG ATACGCATAT CCAGTCGTCG
GATGGCATCC AGGTGATCCG GTTGCCGGAG CACTATGGTG CGCTGTCCCC GATCCTGCAT
GTGGTGCCGC TGCAACTGCT GGCGTATCAC ACCGCCTGCG CACGCGGTAC CGACGTCGAC
AAGCCGCGCA ACCTGGCCAA GTCGGTGACG GTGGAGTAA
|
|---|
| Protein sequence | MCGIVGAVSH RNIVPVLIEG LRRLEYRGYD SCGVAVVRDG ILERARTVSR VAELDAQTQS
SGLAGHIGIA HTRWATHGKP DTVNAHPHFS DETIALVHNG IIENYEPLRD ELRAVGYGFE
SQTDTEVVAH LIHQAYTYPS SATRGDLFGA VRAVTKRLHG AYAIAVVAKD QPDVVVGARA
GSPLVVALGE DESFLASDAL AVAGTANRII YLEEGDVVEI SRGGARIRDV HDHEVEREAR
VVEAHAAAVE LGPYRHFMQK EIFEQPRALG DTLEGISAIT PELFGENAAQ VFSEIDSVLI
LACGTSYYSG CTAKYWLESI AKIPTQVEVA SEYRYRDTVP NPRALVVVIS QSGETADTMA
ALRHARSLGH THTLAVCNVA TSAMVRETEL SFLTRAGTEI GVASTKAFTT QLAALYMLTL
ALAKVRGYLT DAQEAEALTN LRHLPAALHG VLALEPQIIA WSEDFARREN ALFLGRGLHY
PIALEGALKL KEISYIHAEA YPAGELKHGP LALVTEAMPV VTVAPNDALL EKLKSNIQEV
RARGGRLYVF ADSDTHIQSS DGIQVIRLPE HYGALSPILH VVPLQLLAYH TACARGTDVD
KPRNLAKSVT VE
|
|---|
| |