Gene Rmet_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0175 
Symbol 
ID4036960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp181634 
End bp182368 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID637975547 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_582330 
Protein GI94309120 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.928945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGGGTG CGCGCCTGTC ACGCGACAGG CACGCAGGAT TCGTGATTCG TACCACCGGC 
GCGCATCTTC ATTTGCGCGT CCAGCATTGT TTTCAAATGT CTGTTCGATG GCCATTATTG
CACGCCATGC CGCCAAACCA AGCACCGGAC AACGGGCCGG ACAGCCTTTA TTTCACGGCC
CCTGAGGACC GTCGCGCCCT GCGCCGCCGG CTGCTCGCGC TGCGCGCCGC GCTACCCGAT
CGAGAGACGG CGGATGCACA GATCGCGGCA GCGCTCGCGC CACTGCTCGA ACGTCTCGGC
GTGCAACGAC TGGGGTTCTA CTGGCCGATC CAGCAGGAAT TCGACGCACG CGACACCGTG
GCCCGATGGC TGGCCGCCAT GCCCGGCCGC GTGGCCGCCC TGCCCGTCGT GAGCCGGGCC
GCCGCACCGC TCGATTTCCA TGCCTGGACG CCAGACACAA CAATGCGCGT CGGCCAGTAC
GGCATTCCGG TGCCCGATGG CACCGGCGCC GTGACGCCCG ACGCGCTGCT CATTCCATGT
GTCGGATTCA GCGCCAATAA GTTCCGCCTC GGATACGGCG GCGGCTTCTA CGACCGCACG
CTGGCGGCCA TGGCTGCCGC GAACGCCACG CCGATAGCGA TCGGGATCGG CTTTGCCGCG
TGCGAGGCGC CGCTGCAGGC AGCGTCACAT GACCTGCCGA TGGACTGGCT GGTCACGGAA
CTAGGGGCGC GCTAG
 
Protein sequence
MLGARLSRDR HAGFVIRTTG AHLHLRVQHC FQMSVRWPLL HAMPPNQAPD NGPDSLYFTA 
PEDRRALRRR LLALRAALPD RETADAQIAA ALAPLLERLG VQRLGFYWPI QQEFDARDTV
ARWLAAMPGR VAALPVVSRA AAPLDFHAWT PDTTMRVGQY GIPVPDGTGA VTPDALLIPC
VGFSANKFRL GYGGGFYDRT LAAMAAANAT PIAIGIGFAA CEAPLQAASH DLPMDWLVTE
LGAR