Gene Rmet_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0172 
Symbol 
ID4036957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp179577 
End bp180407 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID637975544 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_582327 
Protein GI94309117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.010717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC GTTACTTCAG CTTCGAATTC TTCCCGCCCA AGACGGCGGA GGGCGCGGAG 
AAACTGCGCA ATACGCGCGC GCAGCTTGCG CCGCTGCAGC CCAAGTACAT CTCGGTGACG
TTCGGCGCCG GCGGTACCAC GCAGCAGGGC ACGCTCGATG CCGTGCTGGA GATCCAGCGC
GAAGGTATCG AGGCCGCGCC GCACTTGTCC TGCGTGGGCT CCACGCGCGA CAGCATCCGG
CAGATTCTCC AGACCTATCG CGATGGCGGC ATCCGCCACA TCGTGGCCCT GCGCGGCGAT
ATGCCGTCGG GCATGGGCGA GATCGGCGAG TTCCGCTATG CCAACGAACT CGTCGAGTTC
ATCCGCGCGG AAACCGGTGA CTGGTTCAAC ATCGAAGTGG CCGCCTATCC CGAGTACCAC
CCGCAGGCCC GTTCGCCGCG TCACGACCTG GAAAACTTCG TGCGCAAGGT CAAGGCCGGC
GCGGACTCGG CGATCACGCA GTACTTCTTC AACGCCGATG CGTACTTCCG CTTCGTCGAC
GACGTGCGCG CGATGGGCGT GGAAGTGCCG ATCGTGCCCG GCATCATGCC GATCACGAAC
TACTCTCAGC TGATGCGCTT TTCCGAGATG TGCGGCGCCG AAGTGCCGCG CTGGGTGGCC
AAGCGGCTCG AGTCGTTCGG CGATGACAAG GAAGCAATCC GCGCCTTCGG CCTGGACGTG
GTGACCGACC TGTGCACGCG CCTGCTCGAA GCGGGCGTGC CGGGCCTGCA CTTCTACACG
CTCAACGCCG CCGGCGCGAC CAAGGCGATC TGGCAGCGCC TGAAGCTGTA A
 
Protein sequence
MTDRYFSFEF FPPKTAEGAE KLRNTRAQLA PLQPKYISVT FGAGGTTQQG TLDAVLEIQR 
EGIEAAPHLS CVGSTRDSIR QILQTYRDGG IRHIVALRGD MPSGMGEIGE FRYANELVEF
IRAETGDWFN IEVAAYPEYH PQARSPRHDL ENFVRKVKAG ADSAITQYFF NADAYFRFVD
DVRAMGVEVP IVPGIMPITN YSQLMRFSEM CGAEVPRWVA KRLESFGDDK EAIRAFGLDV
VTDLCTRLLE AGVPGLHFYT LNAAGATKAI WQRLKL