| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0169 |
|---|
| Symbol | |
|---|
| ID | 4036954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 176502 |
|---|
| End bp | 177332 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637975541 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_582324 |
|---|
| Protein GI | 94309114 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCCA CGCCACCCCG CACCCTGACC ATCGCCGGAT CCGACTCCGG AGGCGGGGCC
GGTATCCAGG CCGATCTGAA GACGTTCGCG GCACTGGGAT GTTTCGGCAT GAGCGCGATC
ACCGCGATCA CGGCTCAGAA CACGCTCGGC GTGACCGGCG TCCACGCCAT ACCTGCCGAG
ATGGTGGCCG CGCAGATCGA CGCCGTGGCC AGCGACATCG GCGTGGACGC GGCCAAGACC
GGCATGCTGG GAACGGCCGC GATCGTCGAG GCCGTGGCCG GGGCGGTGGA TCGGCATGGC
ATCCGCAAGC TTGTGGTGGA CCCGGTGATG ATTTCGACCT CGGGCGCCAC GCTGTCCGAC
GACGCGACCA GCCAGGCGAT GGTGAAACTG CTGTTTCCGC GCGCGATGCT GGTCACGCCG
AACCTGCCTG AGGCGTCATA CCTGCTGGGC CGCCGCATCA CGCGCCGCGC CGAAATGGAG
GCGGCCGCAG CAGACCTGCT TGCGCTCGGT TGCAAGGCGG TGCTGCTCAA GGGCGGCCAT
CTGGAAGATG ACGGGCCCGG CAGCCTGGGC CTGGACGACC TGCTGATGCT GGCCGACGGC
ACCGTGCGCG TCTACACCCA TCCGCGCGTC GATACGCCGA ACCTGCACGG CACCGGCTGC
ACGCTGGCCG CCGCCATCGC GGCGCAGCTC GCCCGGGGCG ATGCGCTGCC CGATGCGGTC
GCCGCCGCGC TCGACTTCGT CGCGCAAGCC ATCCGCTCGG GCGCCCGGCT GCGCCTTGGC
GACGGCAACG GCCCCCTCAA TCACAGCTTC GCGCCGCGCG CGCTGGGCTG A
|
|---|
| Protein sequence | MLPTPPRTLT IAGSDSGGGA GIQADLKTFA ALGCFGMSAI TAITAQNTLG VTGVHAIPAE
MVAAQIDAVA SDIGVDAAKT GMLGTAAIVE AVAGAVDRHG IRKLVVDPVM ISTSGATLSD
DATSQAMVKL LFPRAMLVTP NLPEASYLLG RRITRRAEME AAAADLLALG CKAVLLKGGH
LEDDGPGSLG LDDLLMLADG TVRVYTHPRV DTPNLHGTGC TLAAAIAAQL ARGDALPDAV
AAALDFVAQA IRSGARLRLG DGNGPLNHSF APRALG
|
|---|
| |