Gene Rmet_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0167 
Symbol 
ID4036952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp175607 
End bp176041 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID637975539 
Productphenylacetic acid degradation-like protein 
Protein accessionYP_582322 
Protein GI94309112 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGA TCATCCCCGC CGCACCGGGC ACCCCCGATA AGCCTTACTT CGGCATTGAC 
ATTCCGTTGA TGCGCCTGCT GGGCCTGCAG CCCGTGCATA TGGAAGAGGG TCTGTGCCGC
ACGCGTCTGC CGGCCAATCC AAACGTGGTG AACAGCCGGG GCGATGTGCA TGGCGGCACC
CTGATGGCGG TGCTCGACTT CACGCTGAGC GGTGCGGCAC GGTCTCATGC CCCGCTGGAG
ACCGGCGTCA TCACGATCGA CATGTCCACG CATTTCCTGT CCGCCGCACG CGGCGAGCTG
ACGTTCGAGG CGCGCATCAT GCGTCGTGGC GCCAAGATCG CGTTCTGCGA AGGTGAGGCA
CGCGACGCGA CGGGCACGCT CTGCTGCGTG GCCCGTGCAT CGTTCAAGCT CGTGAAGCTG
GTCGGCGGCG ATTAA
 
Protein sequence
MNEIIPAAPG TPDKPYFGID IPLMRLLGLQ PVHMEEGLCR TRLPANPNVV NSRGDVHGGT 
LMAVLDFTLS GAARSHAPLE TGVITIDMST HFLSAARGEL TFEARIMRRG AKIAFCEGEA
RDATGTLCCV ARASFKLVKL VGGD