| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0159 |
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| Symbol | |
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| ID | 4036943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 164406 |
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| End bp | 166088 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637975531 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_582314 |
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| Protein GI | 94309104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA CCTTTGACTA TCTCGTCGTG GGCGCCGGCT CAGCCGGCTG CGCGCTGGCC
GGGCGGCTGG CCGACAGTGG CAACGACAGT ATCGCGCTGC TCGAGGCAGG CGGCCACGAT
CACCATGTGC TGGTACGCAC ACCCGCCGCG GGCGCTGCGT TCCTGCCACG GGCCGGCTCG
CGCAACGTCG GATACCGGAC CGTTCCGCAG GAAGGGCTGG ACGGCAGGCG AGTCAGCCAG
CCGGCTGGAC GCGGCCTCGG CGGCTCGTCC TTGATCTCCG CCATGATCTA CACGCGCGGC
CGCCCGGCCG ACTACGACGC CTGGGCCGAT GCCGGCTGCG ACGGCTGGTC GTGGGACGAC
GTGCTGCCGT ATTTCCGCCG CGCCGAGTGC AACGAGCGTC TGGCCGGCGA GGACGACGAT
CCGCTTCACG GTGGCACTGG GCCGCTGCAC GTCAGCGACC TGCGCTCGCC GAACCCGTTC
GCGCACCATT TCATCGACGC AGCACAGCGC GCCGGCATCG TACGCAACGG CGACTTCAAC
GGCGACGAGC AGGAAGGCGT GGGCTGGTAT CAGGTGACCC AGCACAATGG CGAGCGATGG
AATGCCGCGC GCGCCTATCT GCACGGCGGC AACGCCCGCA ACCGGACCAG CAACGGCGGA
CGCAGCCACC TGCACGTGCT GACAGGGGTG CAGGTGCTGC GCGTGCTGTT CGAGCGCAGG
CGTGCGGTGG GCGTCGTGGC GTGGCGCGAC GGCAAGGAAC TGGAAATCCG CGCGCGGCGG
GAGGTGATCC TTGCCGCAGG CGCGTTCGGG TCTCCGCAAT TGCTGATGGC CTCCGGCGTG
GGGCCGATGA TGCATCTGCG CGAGTTTGGC GTTCCGGTGG TCCACGATCT GCCTGGCGTT
GGCGCCAATC TGCAGGATCA CGTGGATGTC GCGGTGCAAA GACGCGTGCG TGCGTCCGAG
CTGTTCGGCA TTTCGCTGGG TAGCGCCTTC CGGCTGATTG GCGAAAGCCT GCGCTATCGG
CGCGGGCGAT CGGGCATGCT GACATCGAAC CTGGCCGAAG CAGGCGCCTT CGTGCGCAGC
CGCCCCGGGC TGGCCGAGCC CGACCTGCAA TTGAGTTTCG TGGTGGGGCT CGTCGACGAT
GAGACGCGCC GCCTGCGCCT GGGGCATGGC TACGCGTGCC ATGCCAGTGT GCTGCGCCCG
CGCAGCCGTG GCGTGGTGCG GCTGGCGTCG CCGGACTCGC GCAAGGCGCC GCTGATCGAT
CCGCATTATC TGTCGGACCC GCAGGACATG GACGGCCTGC TCGACGGGTT GCGTATCGCG
CGACGTATCC TGGCGCAGGC GCCGCTTGCG GCATTCGGCG GGCAGGATCT GCGGCTGGGC
CAACTGCGTG ACGATGGCGG CAATGACGAA GCCGCGCGGG CCTGGATTCG CGCGCACGCG
CAATCGGCCT GTCAGCCGGT GGGCACCTGC CGCATGGGCA TGGACCCGCT GGCGGTGGTG
GACCCTCAAC TGCGCGTGCG CGGCATCGAG GGCCTGCGGG TGGTGGATGC ATCGATCATG
CCGACGCTGA TAGGTGGTGA CGCAAACGCG CCGGCGATCA TGATCGGCGA GCGTGCCCAC
GACCTGATTC GCTACGCGCC GCATGTGACG TTGCGGATTC TCGAAACCGT GGCGGCCGAT
TGA
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| Protein sequence | MEATFDYLVV GAGSAGCALA GRLADSGNDS IALLEAGGHD HHVLVRTPAA GAAFLPRAGS
RNVGYRTVPQ EGLDGRRVSQ PAGRGLGGSS LISAMIYTRG RPADYDAWAD AGCDGWSWDD
VLPYFRRAEC NERLAGEDDD PLHGGTGPLH VSDLRSPNPF AHHFIDAAQR AGIVRNGDFN
GDEQEGVGWY QVTQHNGERW NAARAYLHGG NARNRTSNGG RSHLHVLTGV QVLRVLFERR
RAVGVVAWRD GKELEIRARR EVILAAGAFG SPQLLMASGV GPMMHLREFG VPVVHDLPGV
GANLQDHVDV AVQRRVRASE LFGISLGSAF RLIGESLRYR RGRSGMLTSN LAEAGAFVRS
RPGLAEPDLQ LSFVVGLVDD ETRRLRLGHG YACHASVLRP RSRGVVRLAS PDSRKAPLID
PHYLSDPQDM DGLLDGLRIA RRILAQAPLA AFGGQDLRLG QLRDDGGNDE AARAWIRAHA
QSACQPVGTC RMGMDPLAVV DPQLRVRGIE GLRVVDASIM PTLIGGDANA PAIMIGERAH
DLIRYAPHVT LRILETVAAD
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