Gene Rmet_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0154 
Symbol 
ID4036938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp158440 
End bp159333 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content64% 
IMG OID637975526 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_582309 
Protein GI94309099 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGA TCTTCACGTG GCTCGGCATC GGTCTGCTGA CGGTGCTGGG CAAACTCCCC 
TACCCGTTCG TGGCCCGCTT CGGCGAGGCG CTGGGCAGCA TTCTGTTCAT GATCCCAAAT
CCGCGCCGCG AAGTGGTGCG GGCCAACCTT CGGCTGTGCT TCCCGGACAA GACCGATGCG
GAAATCGAGG CGATGTCGCG CGAGACCTAC CGCAAGGTCT TCCGCAGCTT TGCCGAGGGC
GGCATCTTCT GGACATGCAA CGAGAAAAAG ATGCGCCAGC TGGTGCAGAT CAACGACCAG
GGCAACCTGC CCTCGCTCGA CGGCTCGCCC CATATCCTGG TGACACTGCA CCTGTCCGGC
CTGGAAGCTG GTGCGATTCG CCTGACGATG CACCTGCGCG ACACCGTGGG CCGTTCGGGC
GCCTCGCTCT ACACGGTGCA GAAGAACGCG CTGTTCGATG ACTTCCTGAA GGTCGCGCGC
GGCCGCTTTG GCGCCAACAT GATTTCGCGC AACGACAGCG TGCGCAACAT CCTCCGCGTG
CTGAAGAAAG GCGAGGCCCT GCAGCTGATC TCCGACATGG ACTTCGGCGA GCGCGACTCC
GAGTTCGTGC CGTTCTTCGG CGTGGAGGCG CTGACCCTGA CATCGGTCTC CCGGCTGGCC
CGGCTTGCGG GCGCCAAGGT CGTACCCATC TACACCGAGC AGTTGCCAGA CTACAAGGGG
TATGTACTGC ACATCCTGCC GCCTTGGGAC GACTACCCCG GCGAAAGCGT CACCGACGAC
ACACGGCGCA TGAACGCGTT CTTCGAGGAT GCCATCCGTC CGCGCGTGCC CGACTACTAC
TGGGTGCACA AACGCTTCAA GCACCGCCCG CCCGGCGAAC CTGACATCTA CTGA
 
Protein sequence
MSRIFTWLGI GLLTVLGKLP YPFVARFGEA LGSILFMIPN PRREVVRANL RLCFPDKTDA 
EIEAMSRETY RKVFRSFAEG GIFWTCNEKK MRQLVQINDQ GNLPSLDGSP HILVTLHLSG
LEAGAIRLTM HLRDTVGRSG ASLYTVQKNA LFDDFLKVAR GRFGANMISR NDSVRNILRV
LKKGEALQLI SDMDFGERDS EFVPFFGVEA LTLTSVSRLA RLAGAKVVPI YTEQLPDYKG
YVLHILPPWD DYPGESVTDD TRRMNAFFED AIRPRVPDYY WVHKRFKHRP PGEPDIY