Gene Rmet_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0147 
Symbol 
ID4036931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp151708 
End bp152562 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID637975519 
Productpeptidase M48, Ste24p 
Protein accessionYP_582302 
Protein GI94309092 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCCG CGCCCGACGA TGGCGTGCGG GTTGATCGCC GCTATTCGAA GGTGCGGGAC 
ATCGTGCCGA TGGAGGTGAT CGACCAGCAG GCGGCGCGCG AGTACGAACA GGTCAAGCAG
GAAGCGATCG CCAAGCACAC GCTGGTCGAC GAAGACGATC CGCAGGTGAA GCGCCTGCGC
GAGATCGGCA TCCGGCTGCT GCCGCAGACC GTGCTCTGGA ATCCGCGCGC CGGGCGCTGG
GCCTGGGAAA TCAACCTGAT CCGGTCCAAG CAGGTCAACG CCTTCTGCAT GCCGGGTGGC
AAGATGGCCG TCTATTCCGG CCTGCTCGAT GAGCTCAATC TGACCGACGA CGAAGTGGCC
ATGGTCATGG GCCACGAGAT CTCGCACGCA TTGGAAGAAC ACGCCCGCCA GCGCGCGGCG
CAGGCCGAGA TCTCGAACCT GGGCGCAAAC GTGGTGTCGC AACTGACCGG CTTCGGCAAC
CTTGGCAATA TGGATATCGG CTCCAATGCC AAGATGCTGT CGCTGCGCTT TTCGCGTCAG
GAAGAGACCG AAGCCGACCT GATCGGCATG GATATCGCCG CGCGCGCCGG GTATGACCCC
CGCGCGGCCA TCACGCTTTG GCAGAAGATG GGCGCAGTGC TCAAGGCCGG CGACGAGTTC
ACCTCGACCC ATCCGTCCGG CCGCAGCCGG ATCGCCGTGC TTCAGGCGCA TATGAATGAA
GTGCTGCCGC TCTATGCCAA GGCCATGAAT ATGCCGATGG AAAAGCTGCC GCCTTACAAG
GCCAATATGG CTGACCTGCA CGACGCGCCG GTCGACGCGG GTGACGAGGA TCTCCAGCAT
CCGCTGAAAA AGTAG
 
Protein sequence
MVSAPDDGVR VDRRYSKVRD IVPMEVIDQQ AAREYEQVKQ EAIAKHTLVD EDDPQVKRLR 
EIGIRLLPQT VLWNPRAGRW AWEINLIRSK QVNAFCMPGG KMAVYSGLLD ELNLTDDEVA
MVMGHEISHA LEEHARQRAA QAEISNLGAN VVSQLTGFGN LGNMDIGSNA KMLSLRFSRQ
EETEADLIGM DIAARAGYDP RAAITLWQKM GAVLKAGDEF TSTHPSGRSR IAVLQAHMNE
VLPLYAKAMN MPMEKLPPYK ANMADLHDAP VDAGDEDLQH PLKK