Gene Rmet_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0143 
SymbolmetX 
ID4036927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp147516 
End bp148688 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID637975515 
Producthomoserine O-acetyltransferase 
Protein accessionYP_582298 
Protein GI94309088 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID[TIGR01392] homoserine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.367433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG TCGCTCCTCC CGCTGGTGTG CTCGACGTGC CGACCGATTC CGTCGGTGTC 
GTTACGCCCC AGCGCATGCA TTTTTCGGAG CCGCTGCAGC TCCGCAACGG CAGCCAGATC
GCCGACTACG ACCTGATGGT CGAAACCTAC GGCACGCTGA ACGCCGCGCG GACCAATGCC
GTGCTGGTCT GTCACGCGCT CAACGCCTCG CACCACGTCG CCGGCATCGC CGCGGACAAT
CCGCGCGATA TCGGCTGGTG GGACAACATG GTGGGCCCCG GCAAGCCGCT CGACACCAAC
CGCTTCTTCG TGATCGGCGT GAACAACCTC GGCTCGTGCT TCGGATCGAC CGGGCCGATG
AGCACCAATC CGTCGACCGG GGCGCCGTAT GGCGCGTTGT TCCCGGTGGT GACGGTGGAA
GACTGGGTCA ACGCGCAGGC GCGCGTGGCC GACATATTCG GCATTCAACA GTTCGCCGCC
GTGATGGGCG GCAGCCTGGG CGGCATGCAG GCGCTGGCCT GGAGCCTGAT GTATCCGGAG
CGGCTGCGCC ACTGCATCGT GGTGGCTTCC ACGCCGAAAC TGTCCGCGCA GAACATCGCG
TTCAACGAGG TCGCGCGCAG TTCCATCCTG TCGGACCCGG ATTTCCACGG CGGCAACTAC
TACGCGCACA ACGTCAAGCC GAAGCGCGGC CTGCGCGTGG CGCGGATGAT CGGCCATATC
ACCTATCTGT CCGACGAGGA CATGGCCGAG AAATTCGGCC GCTCGCTGAA GGCCGAGGAC
ATCCGCTTCT CGTTTGACGT CGAGTTCCAG GTGGAAAGCT ACCTGCGTTA CCAGGGCGAC
AAATTCGCCG AGTACTTCGA CGCGAATACC TACCTGCTGA TCACGCGCGC GCTCGACTAC
TTCGATCCGG CGCTGGCGCA CGGTGGCGAC CTGACGCGCG CCATGGCGCA GACGCAGGCC
GGCTTCCTGG TCGTCAGTTT CACCACGGAC TGGCGCTTTG CGCCGAACCG CAGCCGCGAG
ATCGTCAAGG CGCTGCTCGA CAACAAGCGA CCGGTGTCGT ACGCGGAGAT CGACGCTCCG
CACGGCCACG ATGCCTTCCT GCTCGACGAC GCCCGCTATC ACAACCTGAT GCGCGCCTAC
TACGACCGCA TCGCAGAGGA GATCGGCGCA TGA
 
Protein sequence
MTDVAPPAGV LDVPTDSVGV VTPQRMHFSE PLQLRNGSQI ADYDLMVETY GTLNAARTNA 
VLVCHALNAS HHVAGIAADN PRDIGWWDNM VGPGKPLDTN RFFVIGVNNL GSCFGSTGPM
STNPSTGAPY GALFPVVTVE DWVNAQARVA DIFGIQQFAA VMGGSLGGMQ ALAWSLMYPE
RLRHCIVVAS TPKLSAQNIA FNEVARSSIL SDPDFHGGNY YAHNVKPKRG LRVARMIGHI
TYLSDEDMAE KFGRSLKAED IRFSFDVEFQ VESYLRYQGD KFAEYFDANT YLLITRALDY
FDPALAHGGD LTRAMAQTQA GFLVVSFTTD WRFAPNRSRE IVKALLDNKR PVSYAEIDAP
HGHDAFLLDD ARYHNLMRAY YDRIAEEIGA