Gene Rmet_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0129 
Symbol 
ID4036913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp134975 
End bp135874 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID637975501 
Productalpha/beta hydrolase fold 
Protein accessionYP_582284 
Protein GI94309074 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.144128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG ATGCCAGTGC GTTGCTGTTT CCCAATTTCG AGTGGTTCCG GCTGAAGGTG 
GACGAGGTGG AAATCGCTGG CGTGCGTGGC GGTTCCGGCC CGCCGCTGCT GTTGCTGCAC
GGGTTTCCGC AAAGCCACCT GATCTGGCAC AAGGTGGCCC CGGCGCTGGC CGACCGCTTC
ACGGTGATTG CCACCGACCT GCGCGGATAT GGCAGCAGCG GCGCGCCACC GGCCAGCCCT
GGGCACGAGG CCTACAGCAA GCGCGAGATG GCGCGGGACC AGGTGGAGGT CATGCGCCAG
CTTGGTTTTT CCCGTTTCGC GCTGTGTGCC CACGACCGTG GCGCGCGCGT GGCGCATCGG
CTCTGCATCG ACCACCCCGA GGCGGTCAGC CGCGCGATGC TGCTCGATAT CGCGCCGACA
CTGGCGATGT ACGAGGCCAC CAGCATGGCC TTTGCCGCCG CCTACTGGCA TTGGTTCTTC
CTGATTCAGC CGGCGCCGTT CCCGGAGACC CTGATCAATG CCGAGCCCGC GTTCTTCATC
GACAAGCTGC TGGGCTTGCG CCACGCGGGC CCGAGCCCAT TCGCCCCCGA TGCGATGGCT
GCGTATGTCG CCGCGATGCA GGAGCCGGCG CGCGTCCATG CGATGTGCGA GGACTATCGC
GCCGCCGCTA CCATCGATCT GGACCACGAC CGCGCCGACC GCGAGGCCGG GCGCAAGCTG
GCCATGCCTG TGCGCGTGCT ATGGGGCGAA CACGGCGTGG TGGCGCGCTG CTTCGAGCCG
CTGGCGCTCT GGCAGGCCCT GGGCGACGCG GTCAGCGGCG CGACGCTGCC GTGTGGCCAC
TATGTTCCGG AAGAGGTGCC CGAGCCGCTG CTTGAGGAAA TGCTCGAATT CTTCCGTTAG
 
Protein sequence
MQNDASALLF PNFEWFRLKV DEVEIAGVRG GSGPPLLLLH GFPQSHLIWH KVAPALADRF 
TVIATDLRGY GSSGAPPASP GHEAYSKREM ARDQVEVMRQ LGFSRFALCA HDRGARVAHR
LCIDHPEAVS RAMLLDIAPT LAMYEATSMA FAAAYWHWFF LIQPAPFPET LINAEPAFFI
DKLLGLRHAG PSPFAPDAMA AYVAAMQEPA RVHAMCEDYR AAATIDLDHD RADREAGRKL
AMPVRVLWGE HGVVARCFEP LALWQALGDA VSGATLPCGH YVPEEVPEPL LEEMLEFFR