| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0123 |
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| Symbol | |
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| ID | 4036907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 128153 |
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| End bp | 130312 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637975495 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_582278 |
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| Protein GI | 94309068 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.333478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCGA ACAACACCCG TATTCCGGCG GTGCGTCGCA CCCCGCTGGC GGCGCTTGCC
GCCCTGATCG TCACTTCCGG CGTTGCCTCG CACGCGATGG CCCAGGACAA CGCTGCTGCA
GCGCCGGCCG CGCCGCAAAC GCAACCGCAA CCGCAACCGC AAACGCTGAA GGAAGTGGTG
GTCACGGCCA ATCCGCTCGG CAGCGACCTG AACGAGATGG TCGCGCCCGT CTCCACGCTC
GGTGGCGACG CGCTGACCGT GCGCCAGACC AGCACGCTTG GCGAGACGCT GAACGGCATG
CCCGGTGTCA CCTCCACCTA CTTCGGTCCG AACGCGAGCC GTCCTTCCAT CCGCGGCCTC
GATGGCGACC GCATCAAGTT GCTGCAGAGC GGCGGCTCCA CGCTCGACGC ATCGTCGCTG
TCCTATGACC ACGCGGTGCC GATCGACCCG CTGGTTGCCG AGAAAGTGGA AGTGGTGCGC
GGCCCCGCGG CGCTGATGTA CGGCGGCAAT GCACTGGGCG GCGTGGTCAA TGTGATCGAC
AATCGCATCC CGCGCGACCC CGTCACCGGG GTATCCGGCG CGGCCGATGT CAGTGGCACG
ATCGGTGGCG ACAAGGGGCG CAACGCCAGC GGCCTGCTGG AAGCGGGCAA TGGCACTTTC
GCCGTGCACG CCGACGCCTT TGTCCGCCAG ACCAGCGACC TGCGCATCCC CGGATTCGCG
CGCAGCGCCA ACCTGCGTGC CACGCAGCCG CTGCCCGCAG GAGAGAGCGA GGCCTACGGC
ACGCTGCCGA ACACGAGCTC CCATCAGGAA GGCGGCTCGA TGGGCGGCTC CTACACCTGG
GCGGACGGGT TCCTCGGCGC CAACTACTCG ACCTACCGCA ACGATTACGG CACCCCGGCC
GAGGCCGACG CCCGCATCAA GATGCGACAG GACCGCATCG GCCTGGCGGG CGAGGCGCGC
AATCTGGCCG GCAATACCAA CGGCATCATC GAATCGGTGA AGGGCAGCTT CAACTACACC
GACTACGAAC ACCGCGAAAT CGAAGACGGC GTGACCGGCA CGACGTTCAA GAACCGTGGC
TGGGATACGC GCATCGAGGC CACGCACGGC AAGATCGGCA ATATGAGCGG CGTGATCGGC
ACGCAGTTCG GCCATTCCGA TTTCTCGGCG CTGGGAGAGG AAGCCTTCGT CCCGAGCACC
ACCACCGACA ACGCCGCGCT CTTCGTCTTC GAGGAACTGC CGCTGATTTC GTCGGGCGAT
CTCAAGCTCA ACCTTGGCGG CCGCATCGAC CACAGCAGCG TCAAGGCCAG CGCCAACGGC
AACGATCGCT TCACCGACGA CAACCGCAGC TTCAACGCGG GCAGCGCGTC GGCCGGGCTG
CTGTACAAGC TCAATCCGAT CTGGACGGTC ACGTCGAACC TGTCGTACAC CGAGCGCGCG
CCAACGTTCT ACGAGCTGTA CGCCAACGGT CCGCACCTGG CCACCAACGC CTACGAAATC
GGCGACCCGA ATGCGAACAA GGAACGCGCC ACGTCGATCG ACCTCGGCAT GCGCTTCAAG
CAAGGGGATC ATAGCGGCAG CGTGTCGGGC TACTACAGCC GCTTCCAGAA CTACCTTGCC
CTGCTGAACA CGGGCACGTT CCGCGACGCC GAAGGCAATG TCGTGACGGC CGGCAGCGAC
GGCGCGCTAC CTGTCCTGCA GTACGCGGGC GTGCCAGCCA CGCTGTATGG CTTCGAGGCG
GAAGGCAAGA CGCGCCTGCT GCAGAAGATG CTGACCACCG GCGACACCCT CGACTTCGAG
GCCCGCGCCG ACTACGTGCA TGGCGAAAAC CGCAACAACG GCGAGCCACT GCCGCGACTG
GCACCGCTGC GCCTGGGTGG ATCGCTGGTC TATGCGGCCG GCCCGTGGGG CGCGCGCATC
AATGTGGACT GGAACGCGCG CCAGACCCGC GTGCCGACCG GCGACACGCC GACCGACGCA
TACACGATGC TGGGCGTATC GCTGACATAC AAGCTCAAGG TGTCGGGTAC CCAGACGCTG
CTCTACCTCC GCGGCGACAA CCTGACCAAT ACGGAAGCCC GCAGCGCCAC GTCGATCCTG
CGCGACATCG CGCCGCTGCC GGGTCGCAGC GTCAAGATCG GAATGCGGAC GATGTTCTGA
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| Protein sequence | MFSNNTRIPA VRRTPLAALA ALIVTSGVAS HAMAQDNAAA APAAPQTQPQ PQPQTLKEVV
VTANPLGSDL NEMVAPVSTL GGDALTVRQT STLGETLNGM PGVTSTYFGP NASRPSIRGL
DGDRIKLLQS GGSTLDASSL SYDHAVPIDP LVAEKVEVVR GPAALMYGGN ALGGVVNVID
NRIPRDPVTG VSGAADVSGT IGGDKGRNAS GLLEAGNGTF AVHADAFVRQ TSDLRIPGFA
RSANLRATQP LPAGESEAYG TLPNTSSHQE GGSMGGSYTW ADGFLGANYS TYRNDYGTPA
EADARIKMRQ DRIGLAGEAR NLAGNTNGII ESVKGSFNYT DYEHREIEDG VTGTTFKNRG
WDTRIEATHG KIGNMSGVIG TQFGHSDFSA LGEEAFVPST TTDNAALFVF EELPLISSGD
LKLNLGGRID HSSVKASANG NDRFTDDNRS FNAGSASAGL LYKLNPIWTV TSNLSYTERA
PTFYELYANG PHLATNAYEI GDPNANKERA TSIDLGMRFK QGDHSGSVSG YYSRFQNYLA
LLNTGTFRDA EGNVVTAGSD GALPVLQYAG VPATLYGFEA EGKTRLLQKM LTTGDTLDFE
ARADYVHGEN RNNGEPLPRL APLRLGGSLV YAAGPWGARI NVDWNARQTR VPTGDTPTDA
YTMLGVSLTY KLKVSGTQTL LYLRGDNLTN TEARSATSIL RDIAPLPGRS VKIGMRTMF
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