| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0107 |
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| Symbol | |
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| ID | 4036891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 114493 |
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| End bp | 115173 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637975479 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_582262 |
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| Protein GI | 94309052 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.950091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCG CTCTCGTCCT CGGCGCCTCG CGCGGCCTGG GTCTCGAATT TGTCCGGCAG
TACCGCGCCG ATGGCTGGCG CGTCATCGCC GCCGCGCGTA GCGACGAGGG CGTTGCCGCG
CTCACGGCGC TCGGCGCGGA AGCGCACAAG CTCGACCTCA CCGACGCGGC CGCCGTGGCG
GGGCTCGCCT GGAAGCTCGA TGGCGAGACG CTGGACGTGG CGATCTACAA CGCCGGCGTG
ATCGGCCCGC GTTCGGAAAC GGCGGAACCG GTGACCCGCG AGGAATTCGA CGCGGTGATG
CACACCAACG TGCTCGGTCC GATGATGGCG CTGCCGGTGC TGCTGCCGTT CGTCGAATCC
GGCAATCATG GCCGCGGTGG CGTGCTGGCG GTGCTGTCGT CGCGCATGGG CAGCATCGGC
GCGATGGACA GCAACCGTAG CTGGCTCTAT CGCGTGAGCA AGGCATCGGT GAACGCCGCG
CTGAAGTCCG TTTCGCTCGA TGCGCGCCAT GCGATCTGCG TGGCACTGCA TCCGGGCTGG
GTGCAGACCG ACATGGGTGG CCCGAAAGCC GACCTCACGC CGCAGCAGAG CGTGGCGGGT
ATGCGCCGCG TGCTGGCCGG CGTAGCGCGT CACGATAACG GCAGCTTCCA CAACTACGAC
GGTACGTCGA TTCCCTGGTA A
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| Protein sequence | MPTALVLGAS RGLGLEFVRQ YRADGWRVIA AARSDEGVAA LTALGAEAHK LDLTDAAAVA
GLAWKLDGET LDVAIYNAGV IGPRSETAEP VTREEFDAVM HTNVLGPMMA LPVLLPFVES
GNHGRGGVLA VLSSRMGSIG AMDSNRSWLY RVSKASVNAA LKSVSLDARH AICVALHPGW
VQTDMGGPKA DLTPQQSVAG MRRVLAGVAR HDNGSFHNYD GTSIPW
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