Gene Rmet_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0101 
Symbol 
ID4036885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp107649 
End bp108728 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content65% 
IMG OID637975473 
Productbeta-lactamase-like protein 
Protein accessionYP_582256 
Protein GI94309046 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC TCGAACACCA GCTCCAATAC CCGTTTGGCG AAACCATGCC CGAACCGGGC 
ACTCGGCAGG AAGTCGCACC TGGCGTGTAC TGGCTGCGCA TGCCGCTACC GTTCGCGCTG
GACCACATCA ACCTCTGGCT GCTGCGTGAC CGCATCGACG GGCGCGACGG CTGGACGATC
GTGGACTGCG GCATCACCAA CGACACCATC AAGGCGCACT GGGAAACCAT CTTCGCCAAC
GAACTCGAAG GCCTGCCCGT GCTGCGGGTG CTGGTCACGC ACTGCCACCC CGACCACGTC
GGCCTGGCGC ACTGGCTCTG CAAGCACTGG GATGTGCGGC TGTGGATGAG TCTGGGTGAC
TACATGTCGG CGCGCGTGAT GGCCGGCGGC TCGGGCGTCG GATCGAACGC GGGCGGCGAC
TTCGCGGCCA GCCACTTCGC CCGTCACGGC ATGGTCGATC CCGACAACCT CGAGAAGCTG
CGGGCCCGCA AGAGCTACTA CCCGTCGCTG GTGCCGGACC TGCCCACCCA GTACCGCAGG
CTGATGGATG GCGACACGGT CAAGATAGGC GCGGACCCGG CCACCGCGTC GTGGCGCGTG
ATCACCGGTT ACGGCCATGC GCCGGAACAC GTTGCGCTGT TCAACCCGGC CACCAACGTG
TTGATTTCCG GTGACATGGT GCTGCCGCGT ATCTCGACCA ACGTCAGCGT GTTCGACATG
GAGCCGGAAG CCAATCCGCT GCAGCTCTAC CTGGACTCGC TCGGCAAGTA CGAAGGCCTG
CCGAAGGATG TGCTGATCCT GCCGTCGCAC GGTCGTCCGT TCCGCAATCT TCACACTCGC
ATCAACCAGC TTCGCGAACA CCACGTCGAT CGTCTGGCCG AAACGCTGGC CGCGTGCGCG
GAAAAGCCCT GCAACGCGCA CGACATAGTC AGCGTGATCT TCCGTCGCCA GTTCGACATT
CACCAACTCA CGTTCGCGAT CGGCGAGGCG CTGGCCCACC TGCACGCGCT GTGGCACCGC
GGCGAACTGG TGCGCGTGGT AGGTGACGAT GGGGTAATCC GGTTCAAGAA GGCGGGCTGA
 
Protein sequence
MNALEHQLQY PFGETMPEPG TRQEVAPGVY WLRMPLPFAL DHINLWLLRD RIDGRDGWTI 
VDCGITNDTI KAHWETIFAN ELEGLPVLRV LVTHCHPDHV GLAHWLCKHW DVRLWMSLGD
YMSARVMAGG SGVGSNAGGD FAASHFARHG MVDPDNLEKL RARKSYYPSL VPDLPTQYRR
LMDGDTVKIG ADPATASWRV ITGYGHAPEH VALFNPATNV LISGDMVLPR ISTNVSVFDM
EPEANPLQLY LDSLGKYEGL PKDVLILPSH GRPFRNLHTR INQLREHHVD RLAETLAACA
EKPCNAHDIV SVIFRRQFDI HQLTFAIGEA LAHLHALWHR GELVRVVGDD GVIRFKKAG