| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0071 |
|---|
| Symbol | |
|---|
| ID | 4036855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 78358 |
|---|
| End bp | 79197 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637975443 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_582226 |
|---|
| Protein GI | 94309016 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCAA CCATTGAGCG CGGCACCCCG CGCGAGACGA TCATCGAGGT GCGCAACCTC
GAGAAGCGCT TCGGCGACAA CGTGGTCCAC AAGGATCTGA ACCTCGAGGT CTATCGCGGC
GAGGTGCTGT CGATCGTTGG CGGGTCTGGC TCGGGCAAGA CCGTGCTGCT GCGCCAGATC
GTCGGCCTGG ACCGTCCGAC CTCGGGCACG ATCCGGGTCT TCGGCGAGAA TCCCGCGGAA
CTGTCCGCTG ACCAGTTGCA GGCCCTGCGC AGCCGCTGGG GGCTGCAGTT CCAGCGTGGC
GCGCTGTTCT CCGCGCTGTC GGTGATCGAC AATGTCGCGC TGCCGCTGCG CGAAATGCGC
GCGCTGCCGG ACGACCTCAT CTGCCGGGCA TCCCTGCTCA AGCTGCAACT GGTGGGGCTC
TCCGCCAAGG ACGCCGACAA GATGCCGTCC GACCTGTCCG GCGGCATGAT CAAGCGCGTC
GGGCTGGCCC GTGCCCTAGC GCTGGAACCC GAGCTGGTGT TTCTGGACGA GCCAACCGCT
GGCCTCGACC CGATGGCCTC GGACGACTAT GTGGCCCTGA TCCGCGAACT GCGCCGTGAA
CTCGGCCTGA CCGTGGTCAT GATCACGCAC GACCTCGACA CGCTAGTGGC GCTGTCCGAT
CGCGTGGCCG TGCTGGCCGA CCATCGAGTG CTGGCCGCCG CGCCAATTCC CGAGGTGATC
AAGGTCGACC ACCCATTCAT TCGCGAATAT TTCCTGGGCG AACGCGCCCA GCGCGCGCTG
CAGGCGCTGC CGGCCCCCAA GGGCCCCGGC GCGCCGGACG CGCATCCTGG AGAAGTCTGA
|
|---|
| Protein sequence | MSPTIERGTP RETIIEVRNL EKRFGDNVVH KDLNLEVYRG EVLSIVGGSG SGKTVLLRQI
VGLDRPTSGT IRVFGENPAE LSADQLQALR SRWGLQFQRG ALFSALSVID NVALPLREMR
ALPDDLICRA SLLKLQLVGL SAKDADKMPS DLSGGMIKRV GLARALALEP ELVFLDEPTA
GLDPMASDDY VALIRELRRE LGLTVVMITH DLDTLVALSD RVAVLADHRV LAAAPIPEVI
KVDHPFIREY FLGERAQRAL QALPAPKGPG APDAHPGEV
|
|---|
| |