Gene Rmet_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0070 
Symbol 
ID4036854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp77417 
End bp78358 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content64% 
IMG OID637975442 
Producthypothetical protein 
Protein accessionYP_582225 
Protein GI94309015 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA AGTCAAACGC CTTCCTGGCC GGCGTGTTCA CCATCGGCCT TGCCATCCTG 
GTATCGGTTT CCCTGTTCTG GTTCAGCAGC GATCACACCG TGCGCGTGCC GTACGACCTG
ATCACGCGAT CGACGGTGAA CGGACTGGGG CCGCAGGCCG ACGTGAAATA TCGCGGACTC
GAGGTCGGCA AGGTCTTATC TATCAAGTTC GATCCGCAGG TGCCGGGCCA GATCATCGTC
CGCATCAGCA TCAACCATGA CACGCCAATC ACGCGCACCA CGTATGCCAC GCTAGGCTTC
CAGGGCGTGA CCGGCATTGC CTACGTGCAG CTCGACGATT CCGAGCGCAC GGAGGGCGAC
ACGAGCAGCT CGCCGCGGCT GACGACGTCG GCACGCGAGC CCGCGCGCAT CGTGATGCGG
CCCGGTTTCT TCGAGGAACT GGAAAAGCGC GGCGATTCAC TGCTGACGCA GGCCGAAACA
CTGATGGCAT CGCTCGACAG CATGTTCCAG CCCGCCAACC GCGACGAGTT GATGGCGGCC
ATCCGGGCCG TGCACAAGAC CGCGGACGAC TACTCGCATC TGAAGTCGAC CCTGCAGCCG
GCCGCCGAGA AGCTGCCCAA GGCCGTGGAC AACCTGAACG CAGCGCTGGT GTCGACGAAG
CGGCTGACCG ATGAGATCGG CAACCCCGAC GGCACGGTCA TGCGCACGGT CAACCGCGTT
GGCAACGACC TGCAGGTGGC TGCCGATTCA GTACAGTCCA CCACCACCAT CGTGAATCAG
GAAACGCTGC CACAGATCAA CGGACTGGCA CGCGAGTCAC GCCAGGCGGT GCGCAGCATC
GACCGCGCCG CCAGTCAGTT CAACGACAAG CCAAGTAGCG TGCTGTTCGG CGGGCCATCG
CCCACGCCTG GCCCGGGCGA GCCGGGTTTC CAGGCGCCCT GA
 
Protein sequence
MENKSNAFLA GVFTIGLAIL VSVSLFWFSS DHTVRVPYDL ITRSTVNGLG PQADVKYRGL 
EVGKVLSIKF DPQVPGQIIV RISINHDTPI TRTTYATLGF QGVTGIAYVQ LDDSERTEGD
TSSSPRLTTS AREPARIVMR PGFFEELEKR GDSLLTQAET LMASLDSMFQ PANRDELMAA
IRAVHKTADD YSHLKSTLQP AAEKLPKAVD NLNAALVSTK RLTDEIGNPD GTVMRTVNRV
GNDLQVAADS VQSTTTIVNQ ETLPQINGLA RESRQAVRSI DRAASQFNDK PSSVLFGGPS
PTPGPGEPGF QAP