Gene Rmet_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0061 
Symbol 
ID4036845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp69085 
End bp70077 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID637975433 
Productlipoyl synthase 
Protein accessionYP_582216 
Protein GI94309006 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CCCCGATCGC CACGTCCAGC GAAGTCACGC AATCCCCTGC CGACTACGAT 
CCGACCAAGA AGCAGAAGTC GGCCGAGAAG ACCGCTCGCA TCCCTATCAA GATCGTGCCG
GCGGAAAAGC TCAAGAAGCC GGACTGGATT CGCGTCAAGG CTGCCACTGG CAATTCGCGC
TTCTATGAGA TCAAGGACAT CCTGCGCGCC AACAATCTCG TGACCGTGTG CGAGGAAGCC
AGCTGCCCGA ACATCGGTGA ATGCTTCGGC AAGGGCACCG CCACGTTCAT GATCATGGGT
GACAAGTGCA CGCGTCGCTG CCCGTTCTGC GACGTGGGCC ACGGCCGCCC GGACCCGCTC
GACGTGAACG AGCCCGGCAA CCTGGCGCGC ACGATCGCCC AGCTCAAGCT CAACTACGTG
GTGATCACCA GCGTCGACCG CGACGACCTG CGTGACGGTG GCGCCCAGCA CTACGTCGAC
TGCATCTCGC AAACGCGCGA GCTGTCGCCG AACACGCGTA TCGAAGTGCT GGTGCCGGAC
TTCCGCGGCC GCCTGGACCG CGCGCTGGAC ATCCTGCAGG CATGCCCGCC CGACGTGATG
AACCACAACA TGGAAACCGT GCCGCGCCTG TACAAGCAGG CCCGCCCCGG CGCTGATTAC
GCGCATTCGC TGAAGCTGCT GCAGGATTTC AAGCGCCGCA ATCCCAATGT GCCGACCAAG
TCGGGCCTGA TGGTGGGCCT GGGCGAAACT GACGAGGAAA TCCTCGACGT CATGCGCGAC
ATGCGCGCCC ACGACATCGA CATGCTGACG ATCGGCCAGT ACCTGGCGCC GTCGAACCAC
CACCTGCCGG TTACGCGCTA CGTCCACCCG GACACCTTCA AGATGTTCGA AGAAGAGGCG
TACAAGATGG GCTTCACCCA CGCCGCTGTC GGCGCGATGG TCCGCAGCTC GTATCACGCT
GATCAGCAGG CGCATCAGGC GGGGTTTGCC TGA
 
Protein sequence
MSDAPIATSS EVTQSPADYD PTKKQKSAEK TARIPIKIVP AEKLKKPDWI RVKAATGNSR 
FYEIKDILRA NNLVTVCEEA SCPNIGECFG KGTATFMIMG DKCTRRCPFC DVGHGRPDPL
DVNEPGNLAR TIAQLKLNYV VITSVDRDDL RDGGAQHYVD CISQTRELSP NTRIEVLVPD
FRGRLDRALD ILQACPPDVM NHNMETVPRL YKQARPGADY AHSLKLLQDF KRRNPNVPTK
SGLMVGLGET DEEILDVMRD MRAHDIDMLT IGQYLAPSNH HLPVTRYVHP DTFKMFEEEA
YKMGFTHAAV GAMVRSSYHA DQQAHQAGFA