| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0046 |
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| Symbol | gatB |
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| ID | 4036830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 52552 |
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| End bp | 54006 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975418 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_582201 |
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| Protein GI | 94308991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGGG AAGTGGTGAT CGGCCTGGAG ACGCACACGC AGCTCTCCAC GGCCTCCAAG
ATTTTCTCCG GCACCTCCAC CGCGTTCGGA GCCGAGCCCA ATACGCAGGC CTCGCCCGTG
GACCTGGCGC TGCCGGGCGT GCTGCCCGTA CTGAACCGCG GCGCCGTGGA GCGCGCCATC
CAGTTCGGCC TGTCCATTGG CGCGACGATT GCGCCACGCA GCATCTTCGC GCGCAAGAAC
TACTTCTATC CTGACCTGCC GAAGGGCTAC CAGATCAGCC AGTACGAGAT CCCCGTCGTG
CAAGGCGGCC AGATCACGAT TCAGGTGGAA GGCAAGCAGG GCGTGTACGA GAAGACCGTC
AACCTGACGC GCGCCCACCT TGAGGAGGAC GCCGGCAAGT CGCTGCACGA GGACTTCGCG
GGCATGACCG GCATCGACCT GAACCGCGCG GGCACGCCGC TGCTAGAAAT CGTGACCGAG
CCCGACATGC GCAGCTCGGC CGAGGCCGTG GCCTATGCCA AGGCCCTGCA TTCGCTGGTG
GTGTGGCTTG GCATCTGCGA CGGCAACATG CAGGAAGGCA GCTTCCGCTG CGACGCCAAT
GTGTCCGTGC GTCCGGTGGG CCAGGAAAAA TTCGGCACAC GCCGCGAGAT CAAGAACCTG
AACTCGTTCC GCTTCCTGCA ACAGGCCATC GACTACGAGG TGCAGTGGCA GATCGCCGAG
ATCGAGGATG GCCGCGAGAT CGTGCAGGCC ACCGTGCTGT TCGACCCGGA CACCGGCGAG
ACACGCGCGA TGCGCACCAA GGAAGACGCG CACGACTACC GCTACTTCCC CGATCCGGAC
CTGATGCCGC TGGAGATCGA CGCGGCGTGG GTCGAGCGCG TGAAGAGCGA ACTGCCCGAA
TTGCCGGCCA CGATGCAGGC CCGTTTCGTG TCCCAGTACG GCCTGTCGGC GTACGACGCA
AGCACCATCA CGGCGACGAA GGCGCTGGCG GCGTACTACG AGGCCGTCGT GACCAACGTT
GGCGCAGCCA GCGCCAAGCC GGCGGCGAAC TGGGTGATGG GCGAGATCGC GTCGCAACTG
AACCGCGAAG GCATCTCGAT CGACGAAGCG CCCGTGCGCC CGGCGCAACT GGCTAAGCTG
CTGGCACGCA TTACGGACGG CACGGTGTCG AACAACACCG CCAAGAAGGA CGTGTTCCCG
GCGATGTGGG CTGGCGAGTC CGACGGCGAC GCCGACGCGA TCATCGCGGC CAAGGGCCTG
AAGCAGATGT CCGACACTGG CGAGCTGGAG AAGATCATCG ACGACGTGCT GGCCGCCAAC
GCCAAGTCAG TCGAGGAATT CCGCGCTGGC AAGGAGAAGG CGTTCAACGC ACTGGTCGGC
CAGGCCATGA AGGCCACCAA GGGCAAGGCT AACCCGGCGC AGGTCAATGA ACTGCTGAAG
AAGAAGCTGG GCTGA
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| Protein sequence | MQWEVVIGLE THTQLSTASK IFSGTSTAFG AEPNTQASPV DLALPGVLPV LNRGAVERAI
QFGLSIGATI APRSIFARKN YFYPDLPKGY QISQYEIPVV QGGQITIQVE GKQGVYEKTV
NLTRAHLEED AGKSLHEDFA GMTGIDLNRA GTPLLEIVTE PDMRSSAEAV AYAKALHSLV
VWLGICDGNM QEGSFRCDAN VSVRPVGQEK FGTRREIKNL NSFRFLQQAI DYEVQWQIAE
IEDGREIVQA TVLFDPDTGE TRAMRTKEDA HDYRYFPDPD LMPLEIDAAW VERVKSELPE
LPATMQARFV SQYGLSAYDA STITATKALA AYYEAVVTNV GAASAKPAAN WVMGEIASQL
NREGISIDEA PVRPAQLAKL LARITDGTVS NNTAKKDVFP AMWAGESDGD ADAIIAAKGL
KQMSDTGELE KIIDDVLAAN AKSVEEFRAG KEKAFNALVG QAMKATKGKA NPAQVNELLK
KKLG
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