Gene Rmet_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0045 
Symbol 
ID4036829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp51578 
End bp52480 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID637975417 
Producttransglutaminase-like protein 
Protein accessionYP_582200 
Protein GI94308990 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.607602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TCGGCACGAC CACGCTCAGC GTGCACCACA CCACCACCTA CCACTACGCA 
TGGCCGGTAG AGCTTGCGCA GCAGCGTGCC GTGGTGACGC CACCGTCCTG CGCGTGGCAG
ACCGTCGGGG CCCATTCGAT CGAGGTGGAC CCCGCCCCGT CCCACCAGCA CATGCGCACC
GACGGGTTCG GCAACAACGT GCTGCATTTC ATGCTCGACG TGCCGCACGA GACGATGTGG
CTGACGGCTA CCAGCACCGT CACACTGAAG CCGCGCTGGC AGGCGCTCGA TATCGCCCGC
AGTCCGCGCT GGGAAGACGC AGCGGAGCGG CTACGCTATC GCGCAGGCCA GCCCTTTCAT
CCCGAGACGG AGTTTGTGTA TGCGTCGCCC AACGTCGCAT TGCATGACAG CCTGCGCAAC
TACGCGCTCC TTAGCTTCGC GCCTGGCGTG ACGGTCGCGG CTGGCGCCAT CGATCTGATG
CATCGTATTC ACGCCGACTT CGACTATCAC AGCGAGATCA CGGAGGTGCA TACGCCGGCG
CTGGAAGCGT TCGCGCTGCG CAGCGGCGTC TGCCAGGACT TCGCACAGGT GATGATCGGC
TGTCTGCGCT CGATTGGCCT GCCGGCACGC TACGTCAGCG GTTACCTGTG CACCGATCCA
CCGCCAGGCG AGCCGAGGTT GCTGGGCGCC GATGCCTCAC ATGCGTGGGC CGGCGTCTGG
TGCCCGGAGA ACGGCTGGAT CGATCTCGAT CCCACCAATG CAATGCTGGC CGACACGCGA
CACGTGACGC TGGCCATCGC ACGCGACTAT AGCGATGTGC CGCTGCTGCA TGGCGTGATC
GTGGGGGGCG GGGAGCATAC GGTGGGGGTG GAGGTCAGCG TGGTGCCGGT GATGTCGGCA
TAG
 
Protein sequence
MSDIGTTTLS VHHTTTYHYA WPVELAQQRA VVTPPSCAWQ TVGAHSIEVD PAPSHQHMRT 
DGFGNNVLHF MLDVPHETMW LTATSTVTLK PRWQALDIAR SPRWEDAAER LRYRAGQPFH
PETEFVYASP NVALHDSLRN YALLSFAPGV TVAAGAIDLM HRIHADFDYH SEITEVHTPA
LEAFALRSGV CQDFAQVMIG CLRSIGLPAR YVSGYLCTDP PPGEPRLLGA DASHAWAGVW
CPENGWIDLD PTNAMLADTR HVTLAIARDY SDVPLLHGVI VGGGEHTVGV EVSVVPVMSA