Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0041 |
Symbol | |
ID | 4036825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 44406 |
End bp | 47309 |
Gene Length | 2904 bp |
Protein Length | 967 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637975413 |
Product | osmosensitive K+ channel signal transduction histidine kinase |
Protein accession | YP_582196 |
Protein GI | 94308986 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.538382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGCAT GGCAATCGCC TGCGTGGCAC AATCATCGCC ACCAACCGCC GTTGCCGATG ACCGATCCAG ACGCCCGCCC GGACCCCGAC GCCCTGCTGC AACGCATGCA GGCGGAGCGC GCGCGTGCCG CTCGCGGCAA ACTGCGCGTG TACTTTGGCG CGTCGGCCGG CGTTGGCAAG ACCTTTGCCA TGCTGGGCGC CGCGCGTGCG TTGCGCGAGC AGGGCGTGGA CGTGGTGGTC GGCGTGGTCG AGACACATGG CCGCGCCGAG ACCGAGGCTC TGCTCGATGG ACTCGAGCGC CTGCCGCTGC GCGAGGTTCC ATATCGGGAC CGCGTCCTGG CGGAGTTCGA TCTCGACGGC GCGCTGGCCC GACGCCCCGC GCTGATTCTG GTGGATGAAC TCGCGCATTC GAATGCTGCG GGCAGCCGGC ATCCGAAACG CTGGCAGGAC ATTCAGGAAC TACAGGCCAC GGGCATCGAC GTCTGGACCA CGGTCAATGT GCAGCACCTG GACAGCCTCA ATCAGGCCGT GGGTGGCATC ACCGGTGTGC GCGTCTGGGA GACCGTGCCC GATGCGGTGT TCGACGGCGC CGACGAAGTG GTGCTGGTGG ACCTGCCCGC CGATGAACTG CTGCGCCGGC TGCGCGAGGG CAAGGTCTAC CTGCCCGATC AGGCGCGCCA CGCCGCACGT AATTTCTTCC GCAAAGGCAA CCTGATCGCG CTGCGCGAAC TCGCGTTGCG GCGGACCGCC GATCGCGTCG ACGACGATGT GCGCGCGTAT CGACATGCCG AATCGATCGA TCTGGTCTGG CGCACGCGGG AAGCCCTGGT GGCGTGCATC GGCGCCGGCG ACGATGCCGA GCAGGTGGTG CGCAGCGCGC AGCGTCTGGC GGGCCAGCTC GATTGCGACT GGCATGTGGT GACGATCGCC ACGCCCCAGT TGATGCCGCC ATCCAACGAG GTCCGCGCGC GCATGCGCGC CGCCATGCAA TTGGCAGAGG AACTGGGGGC CCGCACGGAG ACGCTCGCCG GCAACGACAT GGTCAAGGCG GTGGCAGGCT ACGTGCGACG CCACAACCTG ACCAAGGTGC TGCTTGGCCG TGCCCCCGCC GACTGGTATG CGCGAGGGAA CTGGATCGAC AAGGGGCGTG CCTTGCTGGC CCGTGCGCTG TCGCCGTTGC TTGGTGTCGG TAACCGGCTG TTCGGCCGGC AGATGTTCGC CGATGCGCTG GCGGCGGGTT GCCCGGAGAT CGACGTGATC AGGGTGGCGG CCGACTCCAC ACGGGCGGAC CTGCGTCCGC GAGTCCAGGA GGGGCTATCC ACCGAGGCGC ACGATGCGGA GGCCGAAGCC GAGTTGGCCC GCGTGCGCCG TCATAACTAT GGCTGGGCCG TGGTCTGGTG CATGGCGGCG ACGTTCCTGT CGACGTTGAC CAGACCCTGG TTCGACCTGG TCAATATCGC GATGCTGTTC CTGGTTGCCG TGGTAGGCGT GGCGTTGCGT CATGGCCGGG GACCGGCGGC ATTGGCATCG GTGATTTCGG TGGCGGCGTT CGACTTTTTC TTCGTGCCGC CGAGAATGTC GTTCGCCGTC AGCGACGTGC AGTACCTGTT GACGTTCTTC GTGCTGCTGA CGGTTGGTCT GGTGATCGGC CAGCTTACGG CGGGACTACG CGAGCAGGCT CAGGTGTCCG TGCGGCGCGA AACCGATGCG CGCACGCTCT ATGAGCTGGC GCGCGAGTTG TCCGCTGCGC TGACGGCGCA GCAGATCGTC GAGATCGGCG GTCGCTTCCT GCGTGCCGCC TTTGACGCGG ATGGCACTTT TTTCCTCGTC GCAGAGAACG GACGGCTCAT GCCGATGGCC GGCGGAGAAA AGACACCGGA GCCGCGGACA GGCAAAGGCG ATGCCATCGA CAAGGTGTTG GCGCAATGGG TGTTCGATCA CGGTCAGCCT GCCGGCACGG GCACGCACAC GCTACCCGGC AGCACGGTGC TGTATCTGCC GCTGAAGGCG CCGATGCAGA CGCGCGGCGT GCTGGCCGTG GAGCCGCGCG CGTGGCGGGC GCTGGCGGAC CCGGCGTTGC GTCGTCAGGC CGATGTCTTT GCCACGCTGA TCGCGATCGC GATCGAGCGT ATCCATTACG TCGACGTGGC GCAGCGCGCG CTGGTGTCGA TCGAGTCGGA ACGGCTGCGC AGTTCGCTGC TGGCCGCGGT GTCGCATGAT CTGCGTACGC CGCTGACCGG GCTGATCGGC ATGGCCGAAA CGCTGCAGCG CGCGGAGATG CCGCTGCCGG CCAGCGTCGC GGAGACAGTC GAGGCAATGC GCGTTCAGGC ACAACGGATG CGCACGATGG TCGTCAACCT GCTCGACATG GCGCGCCTGC AGCATCACGA CCTGGCGCTC AAGCGTGGCT GGCAATCGCT TGAGGAACTG ATTGGCGCGG CGCTGGCGTC GATGCGCGAC GTGCTCGGTC GGCACCATGT GGAAGTGATG AATCTTGTGG AGCTGCCGCT GGTGGAGTGC GACGATGTGC TGATGGAGCG TGTGCTGTGC AACCTGCTGG AGAACGCGGC GAAGTACACG CCGGCAGGCA CCGCCATCCG CATCCGCGGC GCGGTGGTGG GCGACGAGGT GCAACTGTCA GTGGAAGACG AAGGCCCGGG CGTGCAGTCG GGCCAGGAGC GCTACATCTT CGAGAAATTC ACGCGTGGCG AGCGCGAATC GGCCACCTCC GGCGTCGGGC TCGGCCTGGC GGTCTGCGAG GCGATCATGC AGGCCCATGG TGGTCGCATC TGGGTGGAGG CCGCCCACCC ACATGGTTCG CGATTCACGC TGGCGCTGCC GCGCGGCAAT CCACCGGCTA TCGAGCCAGA GTCGCTGGAC GAACCCATTC CGGATCATCA CTGA
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Protein sequence | MYAWQSPAWH NHRHQPPLPM TDPDARPDPD ALLQRMQAER ARAARGKLRV YFGASAGVGK TFAMLGAARA LREQGVDVVV GVVETHGRAE TEALLDGLER LPLREVPYRD RVLAEFDLDG ALARRPALIL VDELAHSNAA GSRHPKRWQD IQELQATGID VWTTVNVQHL DSLNQAVGGI TGVRVWETVP DAVFDGADEV VLVDLPADEL LRRLREGKVY LPDQARHAAR NFFRKGNLIA LRELALRRTA DRVDDDVRAY RHAESIDLVW RTREALVACI GAGDDAEQVV RSAQRLAGQL DCDWHVVTIA TPQLMPPSNE VRARMRAAMQ LAEELGARTE TLAGNDMVKA VAGYVRRHNL TKVLLGRAPA DWYARGNWID KGRALLARAL SPLLGVGNRL FGRQMFADAL AAGCPEIDVI RVAADSTRAD LRPRVQEGLS TEAHDAEAEA ELARVRRHNY GWAVVWCMAA TFLSTLTRPW FDLVNIAMLF LVAVVGVALR HGRGPAALAS VISVAAFDFF FVPPRMSFAV SDVQYLLTFF VLLTVGLVIG QLTAGLREQA QVSVRRETDA RTLYELAREL SAALTAQQIV EIGGRFLRAA FDADGTFFLV AENGRLMPMA GGEKTPEPRT GKGDAIDKVL AQWVFDHGQP AGTGTHTLPG STVLYLPLKA PMQTRGVLAV EPRAWRALAD PALRRQADVF ATLIAIAIER IHYVDVAQRA LVSIESERLR SSLLAAVSHD LRTPLTGLIG MAETLQRAEM PLPASVAETV EAMRVQAQRM RTMVVNLLDM ARLQHHDLAL KRGWQSLEEL IGAALASMRD VLGRHHVEVM NLVELPLVEC DDVLMERVLC NLLENAAKYT PAGTAIRIRG AVVGDEVQLS VEDEGPGVQS GQERYIFEKF TRGERESATS GVGLGLAVCE AIMQAHGGRI WVEAAHPHGS RFTLALPRGN PPAIEPESLD EPIPDHH
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