| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0031 |
|---|
| Symbol | |
|---|
| ID | 4036815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 34273 |
|---|
| End bp | 35166 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637975403 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_582186 |
|---|
| Protein GI | 94308976 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTATG CGTTCATCGA GCGAAACCGA CGTTACTGGC CGGTCTCGGT CCTGTGTGAG
CTGTTAGGGG TCAGCCCCAG CGGCTATCAC CAGCGCAAGC AACGCACAGT AAGCACCGAC
AGGCCAGATA GAGGCCGACT CAGTGACGAT GCCTTGTTGG CCCACATCAA GGCGATTCAC
GCCGGGGTCA AGGGGGAGTA CGGCTGGCCG CGCATGTGGA AGGAACTGCT GGCGCGTGGG
GTGCGGGTGG GCAAGGAGCG TGTTCGCAAG CTGATGGCGC TGCACGGCAT CCGTGCCCGC
CACAAGCGCA AGTACATCGC GACAACCAAC TCGAACCACG ATTTGCCGGT GGCCCCCAAT
CTGCTGCAAC GCGACTTTAG CCCAGCAGCA CCCAATCAAG TCTGGACGAG CGACATAACC
TATGTGGCGA CCGCCGAAGG CTGGCTCTAC CTGGTGGTCA TCATCGACCT GTTCAGCCGG
CAGGTGGTTG GCTGGTCGAT GCAACCACAC ATGAAGGCCG AATTGGTCAC GGACGCGCTG
CGCATGGCCT GGTTCCGGCG CCGCCCGGAA GCCGGTGTGA TTGTGCACAC CGACCGGGGA
AGCCAGTATT GCAGCCATCT GTTTCAAGAC GCCCTGAAGG CGTATGGCAT GCGCTCGTCA
ATGAGCCGCA GGGGCGATTG CTGGGACAAC GCGCCGACTG AGAGTCTGTG GGGGTCGTTG
AAGGTCGCTC GCCTGCACGG TCGCCAGTTC GCTACCCGCC GCGCCGCAAT GGACGAGGTA
ATTGACTGGC TTGGCTTTTA TAATGCCAGC CGACTCCACT CGACGCTGGG CTACGTCAGC
CCCATGACGT TCGAGAAAAA CTGGTCCGCA GCTCAGCAAC ACCGGGCTGC CTAA
|
|---|
| Protein sequence | MRYAFIERNR RYWPVSVLCE LLGVSPSGYH QRKQRTVSTD RPDRGRLSDD ALLAHIKAIH
AGVKGEYGWP RMWKELLARG VRVGKERVRK LMALHGIRAR HKRKYIATTN SNHDLPVAPN
LLQRDFSPAA PNQVWTSDIT YVATAEGWLY LVVIIDLFSR QVVGWSMQPH MKAELVTDAL
RMAWFRRRPE AGVIVHTDRG SQYCSHLFQD ALKAYGMRSS MSRRGDCWDN APTESLWGSL
KVARLHGRQF ATRRAAMDEV IDWLGFYNAS RLHSTLGYVS PMTFEKNWSA AQQHRAA
|
|---|
| |