Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0017 |
Symbol | |
ID | 4036801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 20369 |
End bp | 21955 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637975389 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_582172 |
Protein GI | 94308962 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGA CCGCCCCCGC CAGCCAGTCC ACCGCAGAGG CCCTAGAGGC CACAGCTTCC CTCCCCCAAG CCGCCGTTCA CGATCACGCG TCGATCATGC GTGTGATCGG TGGCATCGTG CTGTGCATTC TGCTCGCGGC GCTCGACCAG ACCGTGGTGA TCCCGGCCGT GCCGGCGATC GCGAACGATC TCAACGGATT CGGGCACCTG TCGTGGATCG TGACCGCGTA CCTGATCGTG TCGACGGTGA CCACGCCGCT GTACGGCAAG CTGTCCGACA GTTTCGGGCG TCGCCGTCTG CTGATGGTGG CGATCTCGCT GTTCATCCTG GCCTCGGTGG CCTGCGCGCT GGCGCAGACG CTGCCGCAGC TAATCCTGTT CCGCGCGCTG CAGGGCCTCG GCGGTGGCGG CCTGATGTCG CTGGCGCAGG CGGCCATTGC CGACGTGGTG GCGCCGCGCG AGCGCGGCCG CTATCAGGGC TATCTGGCCA CGGTCTGGGC GATCTCGTCG ATCGCGGGGC CGCTGGTAGG CGGCTGGGTG TCCGATCACA TGTCGTGGCG CTGGCTGTTC TGGATCAACG TGCCGCTCGG TCTGCTGGCG ATGACCATGT GCTATCGCGG GCTCGCGCAT CTGAAGCCGC GCGGCGGCCG GCCCCAGGTC GATTGGCTAG GCGCCCTGCT CCTGGCCGTG GCCATTGTCG CGTTCCTGCT TGCCATGAGC TGGGGCGGCG AGGCGTTCGC CTGGATCTCG CCCGAGATGG CCGCCCTGCT GGCGATCTCG CTAGTGGCCG TGCTGTTGCT GGCCTGGCAG GAGCGCCGCG CCGCCGACCC GATGCTGCCG CCGCGCCTGT TCCGCAATCG CGCCTATGTG ATGGGCGTGG GCGCATCGGC GCTGGCCGCG CTCAATATCT TCCTGTGCAT CTTCGCCCTG CCCCTGCATT TCCAGCTTGT TCGTGACGCC GATGCGTCGA TGTCGGGCCT GCTGGTGGTG CCGTTCCTGC TGGCGACCGT CGCCGGCAAC TTCGTGGTGG CATGGCTCGC GCCGCGTCTG GGCCGTATGC GCGTCATCCT GACCATCGGC TTCGTTGCCG CGGCGGTCGG GCTAGTCTCG CTGGCTGCCG TGACGGTCGC CGTACCGACC TTCTTCGTTC TGCTGGCGAT GACGATCGGC GGTATCGGCC TGGGTATGGC GATGGTTGGC ACGCTGATCA GCGTGCAGAA CGCGCTGGAG CGCCGTGACA TGGGCGCGGG CACCGGCGCC TTGCTCGTGC TGCGTTCGCT CGGCAGCTCG ATCGGTGGCG CGCTGGCCGG CACGCTGCTG GCCATGGAGT TTCGCGACGC GCTGGCCCGG GCCGGCGTCA CGCAGGCGCT GGACCTTGGC GCGCTACGGC ATGGCAGCGA GGCGCTGGCG CACCTGTCGC CAGCCGTGCG CCATGTGCTG GCTGGCGGCG TGGAATCGGG CTTTCATCTG ATTTTTGCGG CCGGCGCGGT GGCCACGATC ATCGCGCTGC TGATCGTGCG TCGGATGCCG GATCTGGAAC TGCGCAGCAG CGTGACCGAG CACGCGGCCA AGATCCACAT GGAATAA
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Protein sequence | MSSTAPASQS TAEALEATAS LPQAAVHDHA SIMRVIGGIV LCILLAALDQ TVVIPAVPAI ANDLNGFGHL SWIVTAYLIV STVTTPLYGK LSDSFGRRRL LMVAISLFIL ASVACALAQT LPQLILFRAL QGLGGGGLMS LAQAAIADVV APRERGRYQG YLATVWAISS IAGPLVGGWV SDHMSWRWLF WINVPLGLLA MTMCYRGLAH LKPRGGRPQV DWLGALLLAV AIVAFLLAMS WGGEAFAWIS PEMAALLAIS LVAVLLLAWQ ERRAADPMLP PRLFRNRAYV MGVGASALAA LNIFLCIFAL PLHFQLVRDA DASMSGLLVV PFLLATVAGN FVVAWLAPRL GRMRVILTIG FVAAAVGLVS LAAVTVAVPT FFVLLAMTIG GIGLGMAMVG TLISVQNALE RRDMGAGTGA LLVLRSLGSS IGGALAGTLL AMEFRDALAR AGVTQALDLG ALRHGSEALA HLSPAVRHVL AGGVESGFHL IFAAGAVATI IALLIVRRMP DLELRSSVTE HAAKIHME
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