Gene Rmet_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0006 
Symbol 
ID4036790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp10260 
End bp11189 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID637975378 
Producthypothetical protein 
Protein accessionYP_582161 
Protein GI94308951 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAC GAATGCACGG CTATCTCTAT TTGACGCTGG CGATGATTAC GGTCGGCAGC 
ACCGTGGTGG CCAGCAAGAT CGTGGCCGCG GGCCTGCCAC CGTTCACTGC AACGGCGCTT
CGCTTCGCCA TCGCGCTTCC GCTGTTTCTC GTGCTGATGC GCGTGACCCG AATAACCTGG
CCAATCCTGG CGCCGAGGGA ATGGGGCCTG CTGCTGGTGC AGGCAGGCGC TGGAAGCGTC
GGCTATACGA CGCTGCTGAT CCTGGGGCTC CGACATGCCT CTGCCACCGA CGCGGGCGTG
ATCATTGGCA CGCTGCCAGT GGTCTCCGCG GCAATCGCCA TCATGGTGCT TGGCGAGCGG
CCGCGACGCG CCGTGTTGCT GGCCATCGCA TTGGCGGCTG CCGGTGTCCT GACCATCGTA
TTCCGCAACG ACGCTGGCAG CGCGCACTCG TTGCTCGGCA GCTTGCTGAT CTTCGGCGCC
GTGGGCTGCG AGGGTGTCTT CATCCTGCTC AACAAGCGGA TCCAGACACC GATCGCGCCG
CTTGCGCTCT CGACCATCAT GGCGGTGTTC GGACTCGCGG TGGCGGTGAT ACCGGCCGGC
TTCGAGATGC CGTGGATGCA CGCGCTCTCC GGCAACGCGG TCGCCGCCGT CGCGTACTAC
GCGCTGATTC CAACCGTGGG GGGCTTCCTG CTCTGGTACG CCGGCGCGGC CCGAGTGAGC
GGTGCAGAGG CGGCGCTGTT CACTGCGGTG GCACCGGTAT CAGCGGTGGT GCTCGCTGCC
GCGCTGCTCG GCGAACAGAT CGGCCAGAGC CAGATCATCG GCATCGGTTG CGTGCTGGTC
GCGGTGTTCA GCCTTGGGAT GTCTCAGTCT GCTGACATGA CCGATAGTGC GATGGCAGAT
GCCGAAGGCG ATGCCACTTC GCACCGATAG
 
Protein sequence
MSRRMHGYLY LTLAMITVGS TVVASKIVAA GLPPFTATAL RFAIALPLFL VLMRVTRITW 
PILAPREWGL LLVQAGAGSV GYTTLLILGL RHASATDAGV IIGTLPVVSA AIAIMVLGER
PRRAVLLAIA LAAAGVLTIV FRNDAGSAHS LLGSLLIFGA VGCEGVFILL NKRIQTPIAP
LALSTIMAVF GLAVAVIPAG FEMPWMHALS GNAVAAVAYY ALIPTVGGFL LWYAGAARVS
GAEAALFTAV APVSAVVLAA ALLGEQIGQS QIIGIGCVLV AVFSLGMSQS ADMTDSAMAD
AEGDATSHR