Gene Rmet_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0004 
Symbol 
ID4036788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp6990 
End bp8099 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content54% 
IMG OID637975376 
Producthypothetical protein 
Protein accessionYP_582159 
Protein GI94308949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGGAT TCCGTGTCAC CGGGAGAGGT GAGCAAAAAA GCTGGGTCGT GCTGTTCACG 
ACTGGCGAGG ATAAAGATTG GCCTGACACG CTGGATTTAA GTACTGGTAA GTTTGTCTAC
TTCGGTGATA ACAAGACCCC GGGTCATGAA TTGCATGAAA CGCGTGGTGG CAACAAGGTT
CTTCGATATT CGTTCGAGCG ACTCCACGCT GCAGTGAATC CGCGAGCGGA CGTGGCTCCG
TTTTTGGTGT TCAAGAAGTA CCCACTCGCA CACGGTGCGA GGTCTGTTCA GTTCAAGGGC
CTTGCGGTAC CGGGCTTCCC AAGCTTGTCG TCGACGGAGG ACCTGGTTGC TGTCTGGAAG
TCCTCTGAGG GCCAGCGATT CCAAAATTAT CGCGCTGTCT TTACGATCCT AAACGCGCCT
GTGTTGAGCC GTGCTTGGAT CAACGATCTC AAGGCAGGAG ATTTAAACTC TTCCAATGCA
CCAAGAGCGT GGCGTCAGTG GCGCGAGTCC GGAAAATATT CGCCGCTTGC TGCGGCGCCG
ACCACGAACA TTCGATCTGC GAACGCGCAA AGTCCAGATA CGGCTCTGAA ACGTGAGCTG
CTCGAATGTA TTTGGCAGCA CTACAAAGGC GCACCGATTG CTTTTGAAGC GTTTGCCGCC
CGCGTCTTTC AAATGACCGA TGAGCGCGTC GTCATCGACG AAATCACGAG AGGGGTTGTC
GATGGTGGTC GAGACGCAAT TGGGAGATAT CGGCTTGGGT CTATGGCCGA TCCGGTCTAT
GCAGAATTCT CGCTGGAAGC AAAATGCTAT CGTCCGCCAC TAAACGGTGA CACGCCGATT
ACGGTCAGCG TTAGTGATGT TGCGCGTTTA ATCTCGCGTA TTCGCCATCG GCAGTTTGGC
GTTCTTGTCA CAACCTCAGT GATTGCCTCC CAGGCTTACA AGGAGGTGCG CGAAGATCGC
CACCCGATTG TCTTTATTTC GGGTGGCGAT ATGGTCAATA TCCTCATCGA CAAGGGCTAC
AACACCAGAG GAAGGGTGCA AGAGTTACTT TCCTCGGACT TTGCGCTTGT TGCGGCTGCT
AGCAGCGAGC CGGTTGATAA GCCGCGCTAG
 
Protein sequence
MGGFRVTGRG EQKSWVVLFT TGEDKDWPDT LDLSTGKFVY FGDNKTPGHE LHETRGGNKV 
LRYSFERLHA AVNPRADVAP FLVFKKYPLA HGARSVQFKG LAVPGFPSLS STEDLVAVWK
SSEGQRFQNY RAVFTILNAP VLSRAWINDL KAGDLNSSNA PRAWRQWRES GKYSPLAAAP
TTNIRSANAQ SPDTALKREL LECIWQHYKG APIAFEAFAA RVFQMTDERV VIDEITRGVV
DGGRDAIGRY RLGSMADPVY AEFSLEAKCY RPPLNGDTPI TVSVSDVARL ISRIRHRQFG
VLVTTSVIAS QAYKEVREDR HPIVFISGGD MVNILIDKGY NTRGRVQELL SSDFALVAAA
SSEPVDKPR