| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0003 |
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| Symbol | gyrB |
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| ID | 4036787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3521 |
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| End bp | 6046 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975375 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_582158 |
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| Protein GI | 94308948 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC AGCAGAAACC GCAGCAGGAA AACTCTTACG GCGCCTCTTC GATCCAGATC
CTGGAAGGCC TGGAGGCGGT ACGCAAGCGT CCCGGCATGT ACATCGGCGA TACGTCCGAC
GGCACCGGCT TGCACCACCT CGTGTTCGAG GTACTCGACA ACTCGATCGA CGAAGCCCTG
GCCGGTTATT GCACCGAGAT CCAGGTCACG ATCCACAGCG ACAACTCGAT CTCGATCGTC
GACAACGGCC GCGGCATTCC GCCGGCCGTG AAGTTCGACG ACAAGCACGA GCCGAAGCGC
AGCGCGGCGG AAATCGCCAT GACCGAACTG CACGCCGGCG GCAAGTTCAA CCAGAACAGC
TACAAGGTTT CGGGCGGCCT GCATGGCGTG GGCGTGTCCT GCGTGAACGC GCTGTCGAAG
TGGCTGCGCC TGACCGTGCG CCGCGATGGC CAGGTCAACC TGATCGAGTT CGCGAAGGGT
GAAGTACAGA ACCGCGTTAT CGAGACGGTG ACCGGCCCGG ACGGCCAGCC CGTTGAAGTG
TCGCCGATGA AGGTCATCGG TGCGACCGAC AAGCGCGGCA CCGAAGTGCA CTTCCTGGCC
GACGAGGAAA TCTTCACGAA CGTCGAGTTC CACTACGAAG TGCTGTCCAA GCGCATCCGC
GAACTCTCGT TCCTGAACAA CGGCGTGCAT ATCAAGCTGG TGGACCAGCG CACGGGCAAG
GAAGAGGACT TCGCGTTCTC CGGTGGCGTG AAGGGTTTCG TCGAGTACAT CAACCGCTCG
AAGACCACGC TGCACCCGAA CATTTTCTAC GCGAACGCCG AGAAGGATGG CATCAGCGTG
GAAGTGGCCA TGCAGTGGAA CGATGGCTAC AACGAGCAGG TGCTCTGCTT CACGAACAAC
ATTCCGCAGC GTGACGGCGG TACCCACCTG ACCGGCTTGC GCGCGGCGAT GACCCGTGTC
ATCAACAAGT ACATCGAAGA AAACGAGGTC GCCAAGAAGG CGAAGGTCGA AACCTCCGGC
GACGACATGC GCGAAGGCCT GGCCTGCGTG CTGTCCGTGA AGGTACCCGA GCCGAAGTTC
AGCTCGCAGA CCAAGGACAA GCTCGTTTCC TCCGAAGTGC GCCTGCCTGT GGAAGAGCTC
GTCGGCAAGG CGCTGACCGA CTTCCTGCTG GAAACGCCGA ACGACGCCAA GATCATCTGC
GGCAAGATCG TCGATGCGGC CCGCGCCCGC GAAGCCGCGC GCAAGGCCCG CGAAATGACG
CGCCGCAAGG GCGTCATGGA CGGCATGGGC CTGCCCGGCA AGCTCGCGGA CTGCCAGGAG
AAGGATCCGG CGATGTCCGA GCTGTTCCTC GTCGAGGGTG ACTCCGCAGG CGGCTCCGCC
AAGCAGGGCC GCGACCGCAA GTTCCAGGCG ATCCTGCCGC TCAAGGGCAA GATCCTGAAC
GTGGAACGCG CGCGCTTCGA CAAGATGCTG TCGAGCCAGG AAGTGCTGAC GCTGATCACG
GCACTGGGCA CCGGCATCGG CAAGGAGGAC TACAACCTCG AGAAGCTGCG CTACCACCGC
ATCATCATCA TGACCGATGC GGACGTGGAC GGCTCGCACA TCCGCACACT GCTGCTGACG
TTCTTCTATC GCCAGATGCC GGACATCATC GAGCGCGGCT ACGTGTACAT CGCCCAGCCG
CCGCTCTACA AGATCAAGCA CGGCAAGGAA GAGCGCTACA TCAAGGACGA CAACGAGCTG
AACGCCTACA TGCTGAAGCT GGCAATGGAA AAGGCTTCGC TCAGCCGCCC GGATGGCAGC
GAGATCAACG GTGAAGCCCT GACCGAACTG GCACGCCAGT ACCAGCTCGC CGAAGGCGTG
ATCGGCCGCC TGTCGCGCAT CGTCGATGTG GACGCGCTAC GCGCGATCGC CGACGGCGTG
GCGCTCGACC TCGACAACGC CGCCGCAGCC GAAGCCTCGG CCGTGGCGCT GAAGGCCAAG
CTCGCCGAGA TGCACGCCAA GACGCTGCTC GGCGCCGCGG TCAACGACGA CGGCACCGCC
GACGTCTATG CCCAGTTCGA CGAGAAGACC GACAAGCACC GCCTGATGAT CGCGCGTCGC
CATCATGGCA ACGTGCGTCT GTCACACGTG GATGCGGACT TCGTCCACGG CGCCGACTAC
GCGGCACTCG CCCGCGCGGC CACGACCTTC CAGGGCCTGA TCCCGGACGG CACCAAGGTT
CGCCGCGGCG AAGGCGAGAA GATGCGCGAA CAGACCGTCG CAGACTTCCA CCAGGCCATG
CAGTGGCTAC TCTCCGAAGC CGAACGCGGC GTCTCGCGCC AGCGCTACAA GGGCCTGGGC
GAAATGAACC CCGAGCAGCT CTTCGAAACC ACGCTCGACG TCACGCAGCG CCGCCTGCTG
AGGGTCCAGA TCGAAGACGC CATCGCCGCC GACCAGATCT TCACGACACT GATGGGCGAC
GAGGTGGAAC CGCGCCGGAA CTTTATCGAG TCGAATGCGC TGGTGGCTCG GAATATTGAT
GTTTGA
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| Protein sequence | MTDQQKPQQE NSYGASSIQI LEGLEAVRKR PGMYIGDTSD GTGLHHLVFE VLDNSIDEAL
AGYCTEIQVT IHSDNSISIV DNGRGIPPAV KFDDKHEPKR SAAEIAMTEL HAGGKFNQNS
YKVSGGLHGV GVSCVNALSK WLRLTVRRDG QVNLIEFAKG EVQNRVIETV TGPDGQPVEV
SPMKVIGATD KRGTEVHFLA DEEIFTNVEF HYEVLSKRIR ELSFLNNGVH IKLVDQRTGK
EEDFAFSGGV KGFVEYINRS KTTLHPNIFY ANAEKDGISV EVAMQWNDGY NEQVLCFTNN
IPQRDGGTHL TGLRAAMTRV INKYIEENEV AKKAKVETSG DDMREGLACV LSVKVPEPKF
SSQTKDKLVS SEVRLPVEEL VGKALTDFLL ETPNDAKIIC GKIVDAARAR EAARKAREMT
RRKGVMDGMG LPGKLADCQE KDPAMSELFL VEGDSAGGSA KQGRDRKFQA ILPLKGKILN
VERARFDKML SSQEVLTLIT ALGTGIGKED YNLEKLRYHR IIIMTDADVD GSHIRTLLLT
FFYRQMPDII ERGYVYIAQP PLYKIKHGKE ERYIKDDNEL NAYMLKLAME KASLSRPDGS
EINGEALTEL ARQYQLAEGV IGRLSRIVDV DALRAIADGV ALDLDNAAAA EASAVALKAK
LAEMHAKTLL GAAVNDDGTA DVYAQFDEKT DKHRLMIARR HHGNVRLSHV DADFVHGADY
AALARAATTF QGLIPDGTKV RRGEGEKMRE QTVADFHQAM QWLLSEAERG VSRQRYKGLG
EMNPEQLFET TLDVTQRRLL RVQIEDAIAA DQIFTTLMGD EVEPRRNFIE SNALVARNID
V
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