| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0002 |
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| Symbol | |
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| ID | 4036786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2220 |
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| End bp | 3335 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637975374 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_582157 |
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| Protein GI | 94308947 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.453135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGG TCAAAACCTC GCGAGACAAT CTGCTGCGTC CGCTGCAAAT CGTGAGCGGC
ATCGTGGAGC GCCGCCACAC CCTCCCGATC CTGGCCAACC TGCTGATTCG CAAGTCCGGC
TCGAACGTAT CCTTCCTCTC GACCGACATC GAGATCCAGA TCACGACCCA TGCCGAATGC
GGTGTCGGTA GCGACAGCGT GGCGACCACC GTGGCCGCGC GCAAGCTGCT GGACATCCTG
CGCGCGATGC CTGACGGCGA CGTGGCGCTG TCGCTGAACG ACAAGCGCAT GACCGTGCAG
TCGGGCAAGA GCAGGTTTGC GCTGCAGACG CTGGCCGCGG AAGAATTCCC GACCGTTGCC
GAAGCCGCCG AATTCAACGC CAGCGTGAGC CTGCCGCAGA AGACGTTCAA GCATCTGCTG
GCGATGGTCC ACTTCGCCAT GGCGCAGCAG GACATCCGTT ACTACCTGAA CGGGATGCTG
CTGGTGGTCG ATGGCAAGAA GGTCATGGCC GTGGCGACCG ACGGTCACCG CCTGGCGTAC
TGCGGCGTGG AGCTCGAGAA TGAAGCGACC GGCGTCGGTT CGCGCCAGGA AGTGATCATC
CCGCGCAAGA CCATCCTGGA ACTGCAACGC CTGCTGGAAG ACACCGATGA TCCCGTGCAG
GTGCAACTGG CCGCCAATCA GGTCAAGTTC ACCTTCGCCA ATATCGAACT GATCAGCAAG
CTGGTGGAAG GCAAGTTCCC GGACTTCCAG CGCGTGATCC CGAAGGGCTA CAAGAACGCG
TTTGCGATCG ACCGCGTGCA ACTGCAACAG GCGCTGCAAC GCACGGCGAT TCTGACTACC
GACAAGTTCA AGGGCGTGCG TTGCATTCTC GATACGCACG TGCTGAAGAT CAGCTCCACC
AACGCCGATC AGGAAGAGGC GCAGGAAGAG CTGGAACTCG ATTATTCGGG CGATGCGCTC
GATATCGGCT TTAACGTGAC CTATCTGCTC GATGTGCTCG CCAACCTGAA GAGCGAGCAG
GTGCAGGTCA GCCTCGGCGA CTCCAATTCG AGCGCGCTGA TTACGGTGCC GGAAGACGAC
AACTTCAAGT ATGTCGTCAT GCCGATGCGC ATTTGA
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| Protein sequence | MQLVKTSRDN LLRPLQIVSG IVERRHTLPI LANLLIRKSG SNVSFLSTDI EIQITTHAEC
GVGSDSVATT VAARKLLDIL RAMPDGDVAL SLNDKRMTVQ SGKSRFALQT LAAEEFPTVA
EAAEFNASVS LPQKTFKHLL AMVHFAMAQQ DIRYYLNGML LVVDGKKVMA VATDGHRLAY
CGVELENEAT GVGSRQEVII PRKTILELQR LLEDTDDPVQ VQLAANQVKF TFANIELISK
LVEGKFPDFQ RVIPKGYKNA FAIDRVQLQQ ALQRTAILTT DKFKGVRCIL DTHVLKISST
NADQEEAQEE LELDYSGDAL DIGFNVTYLL DVLANLKSEQ VQVSLGDSNS SALITVPEDD
NFKYVVMPMR I
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