| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6340 |
|---|
| Symbol | |
|---|
| ID | 4036778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007972 |
|---|
| Strand | - |
|---|
| Start bp | 29099 |
|---|
| End bp | 29659 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637975366 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003518264 |
|---|
| Protein GI | 291434883 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000000192595 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000553775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGATACAC GATTATTTGC TTTCGTCGGC GCAGACATTG GCCCTTGGCG GATTGTCAGG
GCCGAAACGA GAGTTGGCGA GCCCCTGCCT GAAGCCAAAA GGCTCAACGT CGTATCCGCT
TCAGAGTTGC AGTCTGAAAC CAATGCACCC TGGATACTTC GTGGAATAAC CAGCAATGAA
CGATATGTCA TGCGCGCAGA GAAGAATGAA ATTGTAGCGA AGCAGCAAGG TCTGGCGCGC
CCAGAAGCAA CGTGCGGTGC GCTAATACCG ATCCGGAAGA ACGCAGCTTG GTGGGAGCTC
ACGCAAGACG AACGCCGGAG CGTTTTCGAA CAGTCGAAGC ACGTCCAAAT CGGGCTTCAG
TATTTGCCTG CAGTAGCGCG CAAGCTCCAC CACTGCCGCG ACCTCTCAGA GAATGAACCG
TTCGATTTTC TGAATTGGTT CGAATACGCG CCAATTCATG AGGTTGAGTT CAACAGGCTG
CTTTCCGAAC TGCGTGCGTC AGAGGAATGG AAATACGTCG ACCGAGAAGT CGATATTCGT
CTTACGCAAG CACAGGTCTA A
|
|---|
| Protein sequence | MDTRLFAFVG ADIGPWRIVR AETRVGEPLP EAKRLNVVSA SELQSETNAP WILRGITSNE
RYVMRAEKNE IVAKQQGLAR PEATCGALIP IRKNAAWWEL TQDERRSVFE QSKHVQIGLQ
YLPAVARKLH HCRDLSENEP FDFLNWFEYA PIHEVEFNRL LSELRASEEW KYVDREVDIR
LTQAQV
|
|---|
| |