| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6320 |
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| Symbol | int |
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| ID | 4036758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | - |
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| Start bp | 6171 |
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| End bp | 7367 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637975346 |
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| Product | tyrosine-based site-specific recombinase activity site-specific DNA integration |
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| Protein accession | YP_003518244 |
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| Protein GI | 291434863 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATC TCCTGCCTAC GCTCCCCTCG CTGGACCACC GCGACGCACT ACCTAACGCC
CTGGCCAGCC CCGTACTGCC AGCCGGCCAA AGCGATGCCC AGTTGGTGCG CACCTGGCTC
GACACCAAGT ACGCGGCGGG CCTCGGCATT CGCGCCAGCA CCCGCGCCCA GTACGCACTC
GAGGCGCACC GCCTGCTGTG GTACGCCCAC GCGCTCGGCC GGCCGCTGGC CAGCTGGCAG
GTAGCGGACG CTAATGGTTA CCTTGCCTTC TTAGCCGATC CGCCAGCGCA CGCGGTCGGG
GACGGCCGTG TGCGGCAGGA CAGCCCGGCT TGGCGGCCCT TGCGCGGCCC GCTCTCTGAG
GCGTCGCGGC GTCAGACTGC CACCATCGTG GGGGGCCTGT TCGAGTGGCT GGTCGGGGTG
GAGGCGCTGC GCGTGAATCC GTTCCAGGCG GTGCCGCGCG CTCGGTCGGC GCGCGGGCCA
GGCTCGCAGC GCCGCTTCCT AGAGGCCGAG CAGCTAGCGG CCGTGTTCGA CGCCGTCGAG
GCGCGACCGG CGCCCACGCT ATGGGCGCAA CTGCACAAGG CACGTGACCG CCTGCTGCTC
GCCCTGCTGT TCCACACCGG GTTGCGCGCC TCCGAGGTGA CGGCGCTTAC GTGGCCGGAC
TTCGAGCGTC AGCGCGGCAG GCATGGGGAT TTCTGGACGG TGCGCATCCG CGAGGCCAAG
GGCGGCAGTG ACCAGCTCGT GCCCTGTGAT AACGTCATGG CGGAACTGGC CCGCTTTCGC
CAGCTGGTGG GGCTCTCGCC CGAGCCGCGT GCCACCGACA CGATGGCCGT CGTCCCAGCC
ATGGCCGGAG GCCGGCAGCG CCTGGCCCCG CTCACCGACA CGCTCGCGCT TCAGCGCCGG
CTTAGCCGTC CGGTACGCAC GCGCCAAGGC CTCTACACGA TCGTGCGGCA GGTGTTCGAG
GCCGCAGCTG TTCGGCTAGA AGCATCTGGA TACGCCGAAG GCGCGGCAAA CCTGCGGGCA
GCGTCCACGC ACTGGCTGCG CCACTCACAC GCCACGCACC TGCTGCGGGC CGGCGTGCCG
GTAACCGACG TGCAACGCAC GCTGCGTCAC CGCGATATCA ACACGACGCG ACGCTACACC
CATGAGGCGC TGGAGGATGT CGCGCGCAGC ATCGGCGGCA AATTACCGGC GGTGTAG
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| Protein sequence | MEDLLPTLPS LDHRDALPNA LASPVLPAGQ SDAQLVRTWL DTKYAAGLGI RASTRAQYAL
EAHRLLWYAH ALGRPLASWQ VADANGYLAF LADPPAHAVG DGRVRQDSPA WRPLRGPLSE
ASRRQTATIV GGLFEWLVGV EALRVNPFQA VPRARSARGP GSQRRFLEAE QLAAVFDAVE
ARPAPTLWAQ LHKARDRLLL ALLFHTGLRA SEVTALTWPD FERQRGRHGD FWTVRIREAK
GGSDQLVPCD NVMAELARFR QLVGLSPEPR ATDTMAVVPA MAGGRQRLAP LTDTLALQRR
LSRPVRTRQG LYTIVRQVFE AAAVRLEASG YAEGAANLRA ASTHWLRHSH ATHLLRAGVP
VTDVQRTLRH RDINTTRRYT HEALEDVARS IGGKLPAV
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