| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6309 |
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| Symbol | |
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| ID | 4036747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 165033 |
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| End bp | 166901 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637975335 |
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| Product | hypothetical protein |
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| Protein accession | YP_582118 |
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| Protein GI | 94152716 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.800389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATC ACTACATCAA CCATTTCCGG CCCATTTACG AATTTCGCGC GGCCGTTGGC
TGGACCGTCG CAGCTTTGTT GATTCTGTTG AGCGGCATGC CGCACGCTGG CTATTTCGCG
CTCTTGTGCC TATGTGCCCT ACTGCTACGG TCCGCGCAGG TTTGGCGCGC CCTCAGATTC
CGACTCGCCA TTTCCACCAA GTGGCTTACC GTGGTCAAGA TCGATGATCT TCTCGATGCC
AGCCGCGGTC TCCGCTCGAA GGACAAAGAC GTGGACGCCA TGTACCTCGG CACCGGCTAC
GAATGGACCC AGAAGCACTG TCAACTTGCG CACGATATTC TGCGCATGCC GTCCACCGAT
ATTCCCGGCT TGCCAAAATG GTTGCCGAAC GAAACGGTAC GTGCCATCGA AAAGGCCTTT
GCTCCCGCCA ACAGCATTGC GGACCATTCG CCTCAAGGCA AACCTTGGAT TGCGGGTCTG
GAGACCAAGA AGCAGCCAGT GCCGTTTCAC TACAAGGCGA TGGGCGGCCA CACGTCCATC
AGCGGCACCA CCGGTGCGGG CAAGACGCGC ACATTCGAAC TGATTTCCAC GCAGGTTATT
CATAACCCTA ATGACGTTTT GATCGTGATC GATCCGAAGA ACGACGTCGA GTGGGTCGCA
AGATGCCGGC GAGAATGCGA GCGTACGGGT CGGAAGTTTC TGTATTGGAA GCAGGCGGCG
CCGTCCCAAT CCATCCGTTT GAATCCACTG GAAAACTGGT CGCAACCGTC GGAGATACCC
ACGCGCGTCG CCCAGCTCAT GGAGGAAGGC CCGTTCCGGC AGTTTGCGTT CCTGTTCATC
GATCGTTCTG TCAAAGGCGA GCTCTACGTC GGCGACAAGC CCAACCTGCG CTCCATCCTC
CAATACGCAC AGAACGGTAT CAACAACCTG CTCGAGCGTG CGCTTCAGCG CTTTTTCCCC
GAAGCCGGCA TGACGGACTG GGAAGACGAG GTCGCCGGAT ACATGCAGCA AGTCGGTCAG
AAAGGTGGCG GTACCCGTCT GGACGCTATG GTTCGACTGT ATATCGACCG CTTCTCGAAT
CTGGGCAAGG GCCACGAGTC GATCGACGGT CTCATCTCGA CGTTTCAACA CGATCGAGAC
CACTACGGCC GTATCATCGC CTCTGCCCTG CCCCTCCTGC AGATGCTGGC CACCGGCGAG
ACCGGCCTCA TGCTAGCGCC CAAAGCGGAT GACTTCGAGG ACGATAGAGA AATCTGGGAT
ATCGACAAGG TCATCAAACA GAAGGCCGTG CTCTACGTCG GTGCGGACTC CCTGTCGAAC
TCCATGGTCG CGCAAGCGGT GATGTCCATG CTGCTCGCGG ACATCGCTTC GGTCGCTGGC
GCGATCTACA ACTTCTACGC GAAGCCTCCC GAGATCGTCC TTCAAGTTGA CGAAACGGCT
GAGGCCATCA ACGAGCAGTT GCTCCAGCTT CTCAACAAGG GGCGTGGTGC AGGCTTCAAG
GCGTTCGTTG CTTACCAGAC GCGTTCCGAT TTCACGGCAA AACTTGGAAA CGTGGCCAAA
ATGCAGCAGG TTTTGGGCAA TCTGAACAAC CAGATCGTTC TACGCTTGGA AGACATCGAC
ACCGCGCAGT GGTTCGCCGA GAAGGCCGGG ACGACGGCTA TCCGCAACCT GGTGATCTCC
AGCAGCACGA GTACCGGCAC GGAAGCGCAC GTAGGTGAAT TTAGTGGCTC CGTTTCGCGA
TCCGCACAGC TTGAAAAGGT ACCCCTGATT CCGCATGACC TGGTCATGCA ACTGCCGAAC
CTCCAGTACT TCCTACGGAT ATCCGGCGGC GCCGTCTACC AAGGTCGTAT TCCAATTATT
CAGGACTAA
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| Protein sequence | MMNHYINHFR PIYEFRAAVG WTVAALLILL SGMPHAGYFA LLCLCALLLR SAQVWRALRF
RLAISTKWLT VVKIDDLLDA SRGLRSKDKD VDAMYLGTGY EWTQKHCQLA HDILRMPSTD
IPGLPKWLPN ETVRAIEKAF APANSIADHS PQGKPWIAGL ETKKQPVPFH YKAMGGHTSI
SGTTGAGKTR TFELISTQVI HNPNDVLIVI DPKNDVEWVA RCRRECERTG RKFLYWKQAA
PSQSIRLNPL ENWSQPSEIP TRVAQLMEEG PFRQFAFLFI DRSVKGELYV GDKPNLRSIL
QYAQNGINNL LERALQRFFP EAGMTDWEDE VAGYMQQVGQ KGGGTRLDAM VRLYIDRFSN
LGKGHESIDG LISTFQHDRD HYGRIIASAL PLLQMLATGE TGLMLAPKAD DFEDDREIWD
IDKVIKQKAV LYVGADSLSN SMVAQAVMSM LLADIASVAG AIYNFYAKPP EIVLQVDETA
EAINEQLLQL LNKGRGAGFK AFVAYQTRSD FTAKLGNVAK MQQVLGNLNN QIVLRLEDID
TAQWFAEKAG TTAIRNLVIS SSTSTGTEAH VGEFSGSVSR SAQLEKVPLI PHDLVMQLPN
LQYFLRISGG AVYQGRIPII QD
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