| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6305 |
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| Symbol | |
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| ID | 4036743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 159499 |
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| End bp | 161955 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637975331 |
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| Product | Type IV secretory pathway VirB4-like protein |
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| Protein accession | YP_582114 |
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| Protein GI | 94152712 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGC TGAAACGACG GCCGCTGGCG GAAATCGCGC CGTGGCTCAC CTCGATTACT
CCCGAGCTCA TCCTGAACAA GGACGGATCA CTGCTCGCTA ACTACGAATT CCGTGGTGTG
GATGCCGATA GCGCGGACGC GAGCGACATC ACCTCCGCGC GAGACCAGCT CGACCAAGCG
TGCCGCTCCT TTGACAACCG CATCACAGCT TGGTGGCGCC TGACGCACCG ACGTACCAAG
GGATACGTCG ACGGCGAGTT CAGCAACGGA ACGGATGCAC GTCTCGACGC GCTCAACCGC
GCCCACATGA CCACGGGCAG GTATTACCGC AATGCGCATT CGCTGAGCAT CGCCTATACC
CCCGAGACGG GCGTGGCCAA GTTCTTCGAG AAGATTGGGC ATCACATGAC CGTGGGCGGT
AAGCCGATTT TCGCCGCCCT GCTCGAAGCG ACCAAGGATA CGGTCCTTGC CCGCAGCGCG
TTCGCCTTCG ACATGGAGAA AATCCGCTCC GACACGCGGC GCTTCGAAGC CATGCTGGAC
GCATTTACCG GTGGGATTCC GCGCATCAAG CCAACGCGCC TTGCGATGCA GGACAGCTAC
GCCGCGCTCC ACCAGGTCGC CAACCCCAGT GTGCCGAAGC GTCGCATCCG TTTCCCGGTA
ACGATGCTCG ACACCCATCT GAGTGAGTCG GAAATTACGG TTGGCTCCGA GCGCCTTCTG
TTCGAATCCG CACATGGCAA ACGCTATGCC GCTATCGTTG CCGTCAAGGA ATGGATGAGC
TTCCAGGAAG CGGCGCTCGA CACTCTGCTG CAAGTCGACG CCGAGCTGGA TATCTGCATC
ATGTACCGCT TTCTGGACAC CGCCCGGGCA ACGGCCTATA TCGAGAAGGT GCGCCGCTTC
TACAAGATGG CGGCGGTCAA CCTCCGTTCG ATGGTCCAGC AATATATGTC GAAGGAGGAG
AACGAGAATG ACGAGGGGCG GGAGGAACTC GCCAAGGAAG CGGGCAAGGC ACTAAAGCGA
CTGACCGCTG AAGGCGTACA GCACGGATTC GCCAACATCT CCATAGTCGT CTACGCCGAC
ACCGAGGCGG AATGCGAGGA TGCCGTCAGC GAGGTGGTAG GAACACTGAC GAACGCTGGC
TTTGGCGCGA TTCGGGAGAA GACCAATCTG ATGGCGGCGT GGAACAGCAC GCTGCCCGGC
CGCTGGGACC GCCAGCGACG CTTGCAGTTT GTCGAGACAC CCGCGGTTTC CGACATTGCT
CCTGTACGGT CGGTGCTCGA GGGTCCGACG CGCAACGACT GGCTGTCGGA GAAGACAGGC
ACGGAAGTGC CGCCACTCAC CTGCCTGCCC ACCCGTCATC GGACTGGCCA GCGCGTCGAT
ATGCATCAAC CAGGCGGCAA TGGACACCTG TTTGTAATCG GGCCCATCGG CGCGGGGAAG
TCAGTTTTCC TCAACTTCCT AGTGTCGCAG GCGGATCGGC ACAAGGCGCG TCGCATCCGT
TTCGACAAAG ACCGCTCCAC GCGTATCCCC ACGCTGCTGA GCGGGGGGGC ATTCATCGAC
GTAACCGGCA AGTTCCAGGC GAGCACACCG GTCAATCCGC TGTCTCTGCT CGCCGACCCG
GGCAGCTTTA CCTACGTCAC CGAATGGCTA ACGCTGGCCC TCGAAGACGA CGATTTCTCC
CTTTCTCCGC AACAGAGTCA GGACATGTTC GAGGCAGTGA AGCTGCTCGC GAGCTATCCC
CGCGAGCGGT GGACCCTCAG TGCCCTCTCC ACGATGCTCC ATGCCGATCT GCGCGAGCGG
CTTCAGATCT GGCTGGTGGG CGGGCAGTAC GGCCACTTCT TTGATCACGT CGAGGATGCG
TTCGCAGTGA GCGACAACCT CTGCATCGAG TGCGGCGAAC TGTTCCAGAA GTTTCCTCGG
GCGGCAGCTC TCTTCACCGA CTATGCGTTC TACCGGATTA GCCAGTCGAT GGACGGCATC
CGCTACACCG TCATCGAAGT GGAGGAATGC GGCTTCTTCT TTCAGAACGA GCGCTTCTAT
AAGCGTTTCG AAGACTGGAT CACCACCATC CGGAAGCTCA ACGGAGCCAT CTGGGCGGCG
ACGCAGTCCC TGCGGCAAAT CGCGCGTGTG GCGAATTTTG AAATCCTCAA GGAAAACATC
GCCAACTGGA TCTATCTGCC GAACAGCCAG GCAAAGACGA GCACGGACCT TTACGGAGAC
ATGTTTGGCC TGACCAAAGA CCAGATCCAG ATGATCTCCG ATGCGGTACC GAACCGTGAC
TACCTCTGGA TCACCAACGT CCAGACCCGC ATGCTCCAGA CCGCTTTCAA CGACGAGATG
GTGGCGATGC TGCGCTCGGA CGGTGTGGCG CAATCCATCT GCGACACCCA TTACGCGTCG
GGCGAGCCCG ACTGGCAAGA CCGCTACGTG CGCGAAATGC TCGCGCGCGC AGCCTAA
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| Protein sequence | MLKLKRRPLA EIAPWLTSIT PELILNKDGS LLANYEFRGV DADSADASDI TSARDQLDQA
CRSFDNRITA WWRLTHRRTK GYVDGEFSNG TDARLDALNR AHMTTGRYYR NAHSLSIAYT
PETGVAKFFE KIGHHMTVGG KPIFAALLEA TKDTVLARSA FAFDMEKIRS DTRRFEAMLD
AFTGGIPRIK PTRLAMQDSY AALHQVANPS VPKRRIRFPV TMLDTHLSES EITVGSERLL
FESAHGKRYA AIVAVKEWMS FQEAALDTLL QVDAELDICI MYRFLDTARA TAYIEKVRRF
YKMAAVNLRS MVQQYMSKEE NENDEGREEL AKEAGKALKR LTAEGVQHGF ANISIVVYAD
TEAECEDAVS EVVGTLTNAG FGAIREKTNL MAAWNSTLPG RWDRQRRLQF VETPAVSDIA
PVRSVLEGPT RNDWLSEKTG TEVPPLTCLP TRHRTGQRVD MHQPGGNGHL FVIGPIGAGK
SVFLNFLVSQ ADRHKARRIR FDKDRSTRIP TLLSGGAFID VTGKFQASTP VNPLSLLADP
GSFTYVTEWL TLALEDDDFS LSPQQSQDMF EAVKLLASYP RERWTLSALS TMLHADLRER
LQIWLVGGQY GHFFDHVEDA FAVSDNLCIE CGELFQKFPR AAALFTDYAF YRISQSMDGI
RYTVIEVEEC GFFFQNERFY KRFEDWITTI RKLNGAIWAA TQSLRQIARV ANFEILKENI
ANWIYLPNSQ AKTSTDLYGD MFGLTKDQIQ MISDAVPNRD YLWITNVQTR MLQTAFNDEM
VAMLRSDGVA QSICDTHYAS GEPDWQDRYV REMLARAA
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