Gene Rmet_6279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6279 
Symbol 
ID4036717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp135126 
End bp135908 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content57% 
IMG OID637975305 
Producthypothetical protein 
Protein accessionYP_582088 
Protein GI94152686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCT TCAATCTTTT CAAGCAAGCG GCCATTTCTT TGCTTGGCCA CAAGAACCCT 
ACACCACCCA GCGCGAAAGT TCATGTGGGA ACCGGCGCAG ACAATGAATT TCAGATCCAC
ATTGGCGGCG TGCCCCATCT CTTTCGGGAT GAGGGCGATC GCGTGGTGCA TTTCAGGGCC
GTATTCGACC GGACGATCCA ACACACGGCG TTCGGTGACA AGTTGTTGCC CGAAGTGATG
CCGCGATGGA GCAAGGTCGG CGTGCACGAC GCAGATGGCG ACACCCTGCA GTCCGTTGCG
GAGAGAGTCG TGCGTGACGC AAAGCTGAGC GCTTCAGTGT CGCGGCAGGA GGATTCCAAA
GCGGAGGTTG TTAGGCAGCA TTCCACTGGC CTTCAAAAGG CTGGTCAGCT AGATGATCGT
GCGGTGCATC GTCCCCAGAC TTCTGCATCT GACGCTTCGT CGTCGACGTA CACCGTCGGC
ACGCTGCTCG AATGGGGAGA AATGGAGTTC CCCAACCGAA AGCCTGGCGG AAAACGCACC
TACACATCGT TTGCAGTGAA ACTCGATACG GGCGCTGGCG TGAAGACGCT GCAAGGCGAG
GGCCTGAAGG ATGTCCTGGC TGATGCCCGT TGCAAGGTGG GCGAGCGCGT CGGCGTCAAA
CGCCTCTATA AAGAGAAAGT TCCTGCATTC GACCAAACGA CGGGGCAGCC CCTTCGTGAT
CGAACAACAG GCGAGCAAAA GCTCTGGGAC CGCTGGGTCT GGTCGATCAA TCGCATTCAT
TGA
 
Protein sequence
MSLFNLFKQA AISLLGHKNP TPPSAKVHVG TGADNEFQIH IGGVPHLFRD EGDRVVHFRA 
VFDRTIQHTA FGDKLLPEVM PRWSKVGVHD ADGDTLQSVA ERVVRDAKLS ASVSRQEDSK
AEVVRQHSTG LQKAGQLDDR AVHRPQTSAS DASSSTYTVG TLLEWGEMEF PNRKPGGKRT
YTSFAVKLDT GAGVKTLQGE GLKDVLADAR CKVGERVGVK RLYKEKVPAF DQTTGQPLRD
RTTGEQKLWD RWVWSINRIH