Gene Rmet_6273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6273 
Symbol 
ID4036711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp128893 
End bp130047 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content62% 
IMG OID637975299 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_582082 
Protein GI94152680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA CAATCAACCT TCGACCAATC CTGGACCAGT ACAACCTGCC CGAACGTTTC 
AAGGCCGAAT TCGCGGTATT GGCGAGCGAG CACCTTCACC TACCGCACAG CGGCACGCGA
GTCAGCGGCC GGTCGCTGTC GCAGATGTCT CAACGCCAGA GGGCGCAGGC GCTTCTTGCG
ATGATGGTGG AGTTACGGCG CATCGGTGGA ATGGCGGTGA CATCGCCGTA TGCAATCCGG
CAGAAGCACG TTCGCTGGCT TGTCCGCTAC TGGGTAGAAG ATCGCAAGCT GAATGTCGGC
ACTGTAGAGT TGCGGCTGAC GCATCTGCGC GCCTTCATGT CGTGGATGGG CAAGGTCAAC
ATGGTGGGAC GGATCGACGA CTACACGGCG CGCCCGGAGG GTTACGTTCG CGGCTACGTC
GCGAAAGAAG ATCGGTCCTG GGAAGGCAAG GGGATCGATG CTCTGGCGAA GGTTGCCGAG
ATTGAGGTGA CGGATCGGCA CGTCGCGCTG CAGCTGAAAC TTGAGGCCGG ATTTGGATTG
CGTGCGAAGG AAAGCTGGCG GCTGCGTCCT GCTCTGGACA TCCTTCCATC GGGCATGCTG
CATGTCCACG ATGGCACCAA GGGCGGCCGG CCGAGACGCG TGCCTATCGA ATTCGACTGG
CAGTACGACC TGCTAGGGCA GGCCGCGCGC TTGGCGCAAG CGACCAATCC TGGGAGGGAG
TCGCTCATCC CGGCGACCTA TACGCAGAAG CAATGGCGCC GGCGTTTCTA TACGGTGTTG
GAGAAGCATG GTGTCACCAA GAATGGCGCT GGCGTGACGG CACACGGGCT TCGCCACCAA
TATCTGCAGC AGATGTACCA GCGTCACAGC GGGCAGCCCG CTGCCGTCAA GGGCGGGGGC
AAGGTTGAGG ACGCGGCTGC GCACCACGAG GCCATGCGAA AGGTGGTGGA GGCCGCAGGC
CATAGCCGCG CGACAAAGGC CAACGCGTAC TTATCGACGT ATGCAACGCA GCGCGCCCAG
GACAGGCCCG AACCCACGGT CGCAGAGATC GAGGCGGCAA TTGCGCAAGC CGACGGTAAC
AAAGCCGCTG CGGCGAAGGC ATTGGGCATT TCGCGCGCCA AGCTATATCG CGTGTTGTCG
AAGCGGGACA CGTAA
 
Protein sequence
MLKTINLRPI LDQYNLPERF KAEFAVLASE HLHLPHSGTR VSGRSLSQMS QRQRAQALLA 
MMVELRRIGG MAVTSPYAIR QKHVRWLVRY WVEDRKLNVG TVELRLTHLR AFMSWMGKVN
MVGRIDDYTA RPEGYVRGYV AKEDRSWEGK GIDALAKVAE IEVTDRHVAL QLKLEAGFGL
RAKESWRLRP ALDILPSGML HVHDGTKGGR PRRVPIEFDW QYDLLGQAAR LAQATNPGRE
SLIPATYTQK QWRRRFYTVL EKHGVTKNGA GVTAHGLRHQ YLQQMYQRHS GQPAAVKGGG
KVEDAAAHHE AMRKVVEAAG HSRATKANAY LSTYATQRAQ DRPEPTVAEI EAAIAQADGN
KAAAAKALGI SRAKLYRVLS KRDT