Gene Rmet_6268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6268 
Symbol 
ID4036706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp123312 
End bp124226 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID637975294 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_582077 
Protein GI94152675 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCAATG ACGCCCTCCC AGCAATGATC CGTCAACTTA CAGTCGCCCT TCTTCTCGCC 
GTCACCGCGG CAGCCGCCTC CGCCAAGGAC GCCGCGCAAT GCGGAAACAT CCTCGAGGCC
GGCAAGCCGG CGGCCAGCCG TCCTGCCGCC AACACCAAGC TGCTCTGCTA CCGCGCGTAC
GCAGTCCTCT ACTCGCCGCA GACCCGCACG GCCCTATGGT CCGCCGAACG CCTGACCGCC
GCCGCGGCGG ATGCGGCCCG TACATTGCCG CGCGACAGTG ATTTCTATGA AGAAGATCGC
TTGCCGGCTG GCGAGCGTGC GCAGCGGCGA GACTTCGTAC GATCTGGATA CGACCGTGGC
CACCTTGCCC CGAGCGGTGA TTTCGGAGAC AAGGCGTCTC AGGCCGAAAG CTTCAGCCTC
GCCAACGTCG TGCCTCAGAA CAGCACGTCG AACCGGAGGA CCTGGAGCCA TATCGAGACA
TCGACGCGCA AGCTCGCGCG TCAGTATGGC GCCATCCATG TCGTGACCGG TCCGGCATTC
ACCAATGCCG CCCGAATGCT GAACGGCCGC GTGCGCATCC CGGACTATTT GTGGAAGGCA
ATCTATGTGC CGGGCGTCGG CGCTGCGGCC TACGTCGTCC GTAACGATGC GACGCAAGCC
TACAGCGTCA TCAGCATTAG CGAACTGTCG CGCTTCACCG GCATCGATCC GTTCCCCGCT
CTGGCGCCGA CAAAGCGAGG CGTCGCATTG GATCTACCGC CGCCGACACC GCATCCGGGG
GAGAAGGCGG CTCGCCGTGT CGCATTTGCC AGGCTTGTTG GAAACGACAA AGCAGGGGAT
GCGGCTGAAT CCCTCGGTGG GCTGGTTCAG CACGCCGGTG CGCTGGCCAC GCTCATGCTG
GCCTACGCGC GGTAG
 
Protein sequence
MFNDALPAMI RQLTVALLLA VTAAAASAKD AAQCGNILEA GKPAASRPAA NTKLLCYRAY 
AVLYSPQTRT ALWSAERLTA AAADAARTLP RDSDFYEEDR LPAGERAQRR DFVRSGYDRG
HLAPSGDFGD KASQAESFSL ANVVPQNSTS NRRTWSHIET STRKLARQYG AIHVVTGPAF
TNAARMLNGR VRIPDYLWKA IYVPGVGAAA YVVRNDATQA YSVISISELS RFTGIDPFPA
LAPTKRGVAL DLPPPTPHPG EKAARRVAFA RLVGNDKAGD AAESLGGLVQ HAGALATLML
AYAR