| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6260 |
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| Symbol | |
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| ID | 4036698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | - |
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| Start bp | 113067 |
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| End bp | 114620 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975286 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_582069 |
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| Protein GI | 94152667 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.441371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCA ACCGGATGAC CATGCGCAAA ATCAAGGAAG TGCTTCGCCT GAAGTGGGCG
TGTGGCCTTT CGCACCGGCA GATCGCTAGG GCGACGGGTG TGAGTGTTGG CGCCGTTTCG
CAGTACGCGG CAATGGCGAA GGCAGCGGGG CTGGATTGGC CGCAGGCGGA CAGCCTGAAC
GAAGATACGC TGGAGCAGCG GCTGTTCGGC GCGCAGAAGC CGGCCAACAG CCCGGGCGGG
CGGGTGATGC CGGACTTCCC CTATCTGCAT CGCGAGTTGC GCCGCAAGGG CGTGACACTG
CAGTTGCTGT GGGAGGAATA CCTGGAGGCG AATCCAAACG TCCCCATTTA CCAATACACG
CAGTTCTGCT GCCGTTACCG GGACTGGGCA GCGACGCTCA AGCGGTCCAT GCGCCAGCAG
CACCGCGCCG GCGAGAAGCT GTTTGCTGAC TTCGCCGGTC AGATGGTGCC GATTCTGGAT
GCGGAGGGCG GCATTGCCTT CGAAGCCAGC ATCTTCGTCG CTGTGCTCGG CGCTTCAAAT
TACACGTACG CGTGCGCCAC CCGGGGGCAG ACCACTGCCG ACTGGATCGG GGGAATGGTC
TGCGCGATGG AATTCGCCGG CGGCGTGCCC GAGCTGCTTG TTCCGGACAA CCCGCGCGCG
CTGGTGGCTC GCCCTGACCG ATACGAGCCA GTGCTGTCCC GAACTGCAGA AGACTTCGTT
CATCACTACG GCACGGCCAT GCTGCCAGCA CGGCCACGCA AGCCGCAAGA CAAGGCCAAG
GTCGAGACTG GCGTACTGAT CGTCGAGCGG TGGATCCTAG CGCGGCTGCG CAATCACCGC
TTCTACAGCT TGGGCGAGCT CAACAAGGCT ATCAAGAAGC TCGTCGCCGA CCTGAACGAC
CGACCGTTCA AGAAGCTGCC TGGCACGCGC CGGGAGTGGT TCGAGCGGTT GGACCGGCCA
GTGCTGCGAC CGCTGCCGCC GCGGCGCTAC GAAGTTGCAA CGTTCAAACA GTGCCGCGTC
AACGTCGACT ACCACGTCGA GATCGACGGC CACTACTACA GCGTGCCGCA TGCCCTGGTG
CGCAAGGCGG TGGAGGCTCG CGTAACTCGC CACACCATCG AGATCCTGTA CGGCGGCAAA
CGGGTGGCGC TGCACGCGCG CAATACCCGC AAGGGCAGCC ACAGCACGGT CAAGGAACAC
ATGCCGGTGG CCCACCGCGC GCACCTCGAA TGGACGCCCG GCCGGCTGCT CAACTGGGCA
GCCTCGATTG GGCCCAACGT CGCCGTCATC GTCGAATACC AGCTCACCCA CAAGAGCCAT
CCCGAGATGG GCTATCGCGC CTGCCTGGGT CTGCTGAGTC TGGCCAAGAA GTACAGCAAG
GAGCGGCTCG AAGCCGCTTG CGCCCGCGCC GTCGCCATTG GCTCGCTCAC GCGTAAGTCT
GTGGTCTCCA TCCTTGAAAA CCATCTGGAC CGGCAAGCCA CTCTGCCGGT ATCGCAAACC
GAGTGGCATT CCCCCATGCA CGACAACGTG CGCGGACCCG ACTACTACCA TTAG
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| Protein sequence | MPANRMTMRK IKEVLRLKWA CGLSHRQIAR ATGVSVGAVS QYAAMAKAAG LDWPQADSLN
EDTLEQRLFG AQKPANSPGG RVMPDFPYLH RELRRKGVTL QLLWEEYLEA NPNVPIYQYT
QFCCRYRDWA ATLKRSMRQQ HRAGEKLFAD FAGQMVPILD AEGGIAFEAS IFVAVLGASN
YTYACATRGQ TTADWIGGMV CAMEFAGGVP ELLVPDNPRA LVARPDRYEP VLSRTAEDFV
HHYGTAMLPA RPRKPQDKAK VETGVLIVER WILARLRNHR FYSLGELNKA IKKLVADLND
RPFKKLPGTR REWFERLDRP VLRPLPPRRY EVATFKQCRV NVDYHVEIDG HYYSVPHALV
RKAVEARVTR HTIEILYGGK RVALHARNTR KGSHSTVKEH MPVAHRAHLE WTPGRLLNWA
ASIGPNVAVI VEYQLTHKSH PEMGYRACLG LLSLAKKYSK ERLEAACARA VAIGSLTRKS
VVSILENHLD RQATLPVSQT EWHSPMHDNV RGPDYYH
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