| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6238 |
|---|
| Symbol | |
|---|
| ID | 4036676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007972 |
|---|
| Strand | - |
|---|
| Start bp | 86817 |
|---|
| End bp | 87956 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637975264 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_582047 |
|---|
| Protein GI | 94152645 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.939997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.417124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTCG ATCCTCGGTC GTTTGTTCCA GCGCTCGATG GAGGACAACC CGGATGGTCG
TTTGCGCGAC AGCATCCCGC TGCCAGACAT CGACCTTCCC ATGGTTTTCT GACGCTCCCG
GCCATCGCGG CGGAGACCCC CGGTCGTGCG TTCCTGTCGT TCGGTGACGA GCCCGATGCG
CTCGAACTTG CTCGCGCGCA ATTCGAGACT GGCGTGCTTC GAGCCAGTGA CGTCGTCAAT
CCGACCAGCG CCGCGGATGC GTTCGCGCAG GCGATGTTTG CGTGGCTGGC CGCGCGAATG
CCTACCTGCC GCAGGCTGAA CTTCAGCTTC TCGCTTGTCG ACCTCAATGC GGCGAAGGAT
CAGCTGATGC AGTTTGGCTG GGATGACCAA GTGGATGCAT CGCTTTACCT GGCCATCGAC
CTGCCTGGCG ATGAGGTCTA TTTCATTGGC AAGGCCCGGG CAGATGCGCT GCGTGCAGTG
CATCCCTACC TGCTCTACAC CGCCATGTCG CTGATCAATC TGGCCAGCTC GAAATCGTTG
CACCTTCGTA CACCGGATGT CTTGCTCGAC CTGTTCGCGC GCTGGCACTG GGAGTACGAC
TGCACCCTGG CCAACGACGA TGATGCGCGT GAGTTTCTCA AGAATGGCTG TGGCATGGAT
GAAGGCGACA TCGCACGGTA TCTGCCATCG GCCGTCCGTC CCGAGCTCGC GCCCGACGAC
GTGCTTCCAC CGTTCTGTCA TGCGTACCCG GAGTCGCGCA AGCTAAAGAC CGTTGGCAGC
AGGAAGCTCT ACGAGCTGGC CCGAAGCCAG CATGGTTGGC TCAAGGATGT TTGCGTGGCG
CTGGCGGAGT TGAATCTCGC GGTCAAACGA CAGCGCGACC GCTCGGCCGT TGCTGACTCA
CAGTGGGCTG AGCCGGCCCA CTCCGCGGCG ACCTTGGCCT ATGCAGAGTC GGACTACGTC
ACACAGGTGC TCGACGACCT TTATGACGGG TACGCTAACA GCGGTGACGC GACACTGTTC
CAGTGCTTCA TTCCCATCGC CGTTGAGCCA AAGGCGATCC GGCAGCAGTT CGAGGATTTG
AGCGGCATGT TCAAGATCAT CGCTGCGCTT GATCGCGTTC TCACACTTAT CTCTGACTAG
|
|---|
| Protein sequence | MLFDPRSFVP ALDGGQPGWS FARQHPAARH RPSHGFLTLP AIAAETPGRA FLSFGDEPDA
LELARAQFET GVLRASDVVN PTSAADAFAQ AMFAWLAARM PTCRRLNFSF SLVDLNAAKD
QLMQFGWDDQ VDASLYLAID LPGDEVYFIG KARADALRAV HPYLLYTAMS LINLASSKSL
HLRTPDVLLD LFARWHWEYD CTLANDDDAR EFLKNGCGMD EGDIARYLPS AVRPELAPDD
VLPPFCHAYP ESRKLKTVGS RKLYELARSQ HGWLKDVCVA LAELNLAVKR QRDRSAVADS
QWAEPAHSAA TLAYAESDYV TQVLDDLYDG YANSGDATLF QCFIPIAVEP KAIRQQFEDL
SGMFKIIAAL DRVLTLISD
|
|---|
| |