Gene Rmet_6228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6228 
Symbol 
ID4036666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp79038 
End bp80588 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content62% 
IMG OID637975254 
Producthypothetical protein 
Protein accessionYP_582037 
Protein GI94152635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0896395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTGA TTCATATCGG CCAACGCGCC GAGCATCGCA CCACGCTCGC CGGCGTGCTG 
CAGTACCTGA ATGAAGATAG AGACGGGAAG GCAGCGCCAC GCGTCGAAGA TATCGCAGTG
CGCCATGTCG AACGCGGCGC AATTCCAGTG GTTCGACTGG CCGGCGGAAA CTTTGCCGTT
CGACCCGTTG GCACGCGGCG GGCCATCCTT TCGATGATCC TCGACGAGGT GGATCGGTTT
ATCGTTCGTG TCGGCGGCAA GATCCTGCGC CCACACGAGA TGAGCCGCGC CGCCTGGGGC
GCCGTGGTGG CCGCTGGCCG CTTGGCGTAT TTCCCCGAGG AGGCTATCGA CATGTCTCAC
GACGATGCAG GTCCGCTGTT CCAGACGGTA GATCTGTTTG AGGATCGCGG AGCGTTCGAT
ATCGCAGGCT TCGTTTGCGG TGAATTTGTC CGCCGCTTCG GCTATGGCAC GAATGGCCCG
CTGTATCACC CGGCCGCGAG TCCCAACTGC CGGCATGAGG TACATGTCGC CTACGCGCTG
ATGCGCGGAG AGAAGGTGCG GGATTGCATC ATCAATACCT ACCGCGACAA TCCGCACCAT
GCGCGGTCCG AGTTCTGGAT GCAGCCCTTG ATCGAAGTGC CGGCCCTGCG AGGAGCCCTG
TCGTCCAGCG TGCTGCAAGC GCTCTGCCAG GTCATGCGCG GGGAGAAGCT GGAGATCACG
CCGCACAACG CTCCCAGACT GCTCGCAGCA GTGCGTAACG TGCCGAGTGA CGGTGGCTAC
GTGGCTGTCG ATGACGCTCT TTTCGCGGCC GGAATTGTTC CTCCGCGGAC GATGCCCACG
CCCAAGCCCC TCGAAGGTGA GAATGCACGG CCGGCCACCA AACTGGCGGC GCGAATCCAC
GGTCTGATAA GCGAGCGGCA GTACCAGGAA GCCATGAAAA AGGCGGCTGA GGAGCGCGAA
GGGCAGAAAA TCAGCCAGCG CGAGTTTGAT CGTCAGACCA AGGCGGCCGC AATCTACCGG
GCCGGTTATG GATACGATTG GGCCAACCGG GTGGCGCTCG CGGTCATGGA GCGCAATGTT
GCGGCAGTAC TCCACATCTT CGACGGCCCC AAGGACTGGA ATACCGACTC TAAGCGCGCT
CTGCGTGACG AACTCGGTGT CGATGTCTTG CAATGCAGCG CGGCAGAGCG CCGTCGTCGG
CTTTTCGAGC TATGTGGGTT CTCAGTAGAC GAGCAAGCGC AATGGGAAGC ACATGAAGCC
ATCGACAAAG CGCGCAAGCG CGCTGAACGT TCGATGGCCG ATGCAATATC GTTGGCGGAA
AGCACGACCT ACAGGCTCGA GACCGGTCAG CAAATGAACG GACGCGAGTA CGTCGATTTC
TGCATCGAGG CCGGCTTTAC CCAGCTCGTC GACGAGCGTC GGGGCAATGT CACGCGCTAC
CGTATCTATG ATCCGGTGAA GCGCATGTCG CGGCCGTTGC GTGCAAAGGA CGGCACGCTC
AACTATGCGC GGGCACGCAT TGCGCAAATC GCCCCCGAGG TGACCGCTTG A
 
Protein sequence
MYVIHIGQRA EHRTTLAGVL QYLNEDRDGK AAPRVEDIAV RHVERGAIPV VRLAGGNFAV 
RPVGTRRAIL SMILDEVDRF IVRVGGKILR PHEMSRAAWG AVVAAGRLAY FPEEAIDMSH
DDAGPLFQTV DLFEDRGAFD IAGFVCGEFV RRFGYGTNGP LYHPAASPNC RHEVHVAYAL
MRGEKVRDCI INTYRDNPHH ARSEFWMQPL IEVPALRGAL SSSVLQALCQ VMRGEKLEIT
PHNAPRLLAA VRNVPSDGGY VAVDDALFAA GIVPPRTMPT PKPLEGENAR PATKLAARIH
GLISERQYQE AMKKAAEERE GQKISQREFD RQTKAAAIYR AGYGYDWANR VALAVMERNV
AAVLHIFDGP KDWNTDSKRA LRDELGVDVL QCSAAERRRR LFELCGFSVD EQAQWEAHEA
IDKARKRAER SMADAISLAE STTYRLETGQ QMNGREYVDF CIEAGFTQLV DERRGNVTRY
RIYDPVKRMS RPLRAKDGTL NYARARIAQI APEVTA