Gene Rmet_6211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6211 
Symbol 
ID4036649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp60398 
End bp61453 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID637975237 
Producthypothetical protein 
Protein accessionYP_582020 
Protein GI94152618 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.286118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTC GTACCGCATC TCCGGCATTA CTGGCCGCTC TGCTTTTCGG AGCTAGCACG 
CCGCTGGCCA AGGCGCTAAC CGGTTCCGTT GCCCCACTCC TGTTGGCGGG CTTGCTCTAT
CTTGGCAGTG GCATCGGACT GGCGCTTGTG CTCGCAATCC GAAGAGCCTG GATCACGCCT
GACCCAGGAA ATGATGACGT GGGTATTCCG CGAGGGGAAG TGCCGTGGCT GATCGGCGCC
ATCCTCGCTG GCGGCGTAGC GGGGCCAGCG TTGCTGATGA CCGGGCTCGT CTCAACCAAT
GCCGCTTCGG CATCCCTGCT GCTGAACGTG GAGGGTGTGT TCACGGCCGT CATCGCCTGG
GTGGTGTTCA AGGAGAATGC TGACCGCCAG ATTGTCCTGG GGATGATCGC GATCGTGGCC
GGTGGCCTTC TGCTGTCTTG GCAGCCGGGC AGCCTGCAGA TGTCAACCGG TGCGCTGCTT
ATCGTGGGTG CCTGCCTGTG CTGGGCCGTA GATAACAACC TGACCCGCAA GGTCTCCAGC
AATGACGCGC TGCTCGTCGC CTGCCTGAAG GGGCTTGTCG CTGGGCTATG CAACACCACC
CTCGCCTTGA CGCATGGGGC GGTGTTTCCA TCGGTCAGTA CTGCGGCGGC AGCGCTGATC
ATCGGATTCG CCGGATACGG TGTAAGCCTC GCCTTGTTTG TGGTGGCGCT GCGGCTGTTG
GGCACTGCGC GAACCGGGGC ATATTTCTCT GTCGCCCCAT TATTTGGCGT CCTGCTTGCG
TTTGCGATCT GGCCTGAGGT GCCAGGCTTC GCATTCTGGG CGGCTTTGGC TTTGATGGCC
TTGGGTGTGT GGTTACATCT GCGAGAGAGG CACGAGCATG AGCATACCCA TGAGCCACTG
GAGCATAGCC ACTCGCATCG GCACGACGAA CACCATCAGC ATGAGCATGA CTTCCCATGG
GATGGGAAGG AACCCCACAG GCATTGGCAT CGGCACGAGG TGATGGTGCA CAAGCATCCA
CACTACCCGG ACGTGCATCA TCGCCATTCT CACTAG
 
Protein sequence
MSIRTASPAL LAALLFGAST PLAKALTGSV APLLLAGLLY LGSGIGLALV LAIRRAWITP 
DPGNDDVGIP RGEVPWLIGA ILAGGVAGPA LLMTGLVSTN AASASLLLNV EGVFTAVIAW
VVFKENADRQ IVLGMIAIVA GGLLLSWQPG SLQMSTGALL IVGACLCWAV DNNLTRKVSS
NDALLVACLK GLVAGLCNTT LALTHGAVFP SVSTAAAALI IGFAGYGVSL ALFVVALRLL
GTARTGAYFS VAPLFGVLLA FAIWPEVPGF AFWAALALMA LGVWLHLRER HEHEHTHEPL
EHSHSHRHDE HHQHEHDFPW DGKEPHRHWH RHEVMVHKHP HYPDVHHRHS H