| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6193 |
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| Symbol | |
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| ID | 4036631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 42801 |
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| End bp | 44288 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637975219 |
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| Product | phage integrase-like SAM-like |
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| Protein accession | YP_582002 |
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| Protein GI | 94152600 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.126905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000249234 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCGG CCGACTGGAT CGATACGGGC GCGGTGCCGC CGCGCCCCTT GCCGGCCAAG
GTAGACGCGG CGCTCGCCTA CCTCGCCGAG GCGCTCGGGC ACCCGGTCTA CGCGCACTGG
ACCCTGACGC GCATCAAGCG CCGCTACGGA TCGCTCGCGG ACGCCAAGGC GGCGCAGCCG
ACGGTCCTCA AGTTGCTGCT GACCCACGAC GGGGCGGTCG AGTACTGGGA GCGCGGGCGT
CTGCGCACCG CGCCGGCGGA TCAGGCGCCG AGCCCGGACG CGGTCCTCGC TCGGCTGCTG
CACACGCATC GGCGTCGCTT CCGGTCCGCC GACGCCTCGG CGAACGCAGG GGCAGTGCCG
GCGACCGCGC AGACAACGGG GCTGGTGGCA AATCCGTGGT TGGCTGCGCA CAGTCACGCA
GATCACGCGT GGCTCGCGCG CACCGGCCGC TTTGCCCAGC CACAGGCCGC CGCCAACACG
CTGGGCGCCG TCGACGACGC GCAGGCGCTG GCGCTTTTTC TGCGCGACCG GACTGGCCGA
TCGTCCCACA CGCTACGCGC CTATGGGGCC GAGCTGCGTC GGCTGATGCG CTGGTGCGGC
ACGCATGGCT TCGGGCCTTT TTCGGATCTG ACGCGCCAGC AACTGCTCGC CTACCGGCAC
ACGTTGGAGC ACGGCTCGTC CGGCACCGCG AACACCACAC CGCCGCTGTC CGAAGCGACC
CGCACGCGCG CACTCGCGGT GGTAGCCAGC CTCTACGGCT ACTGGTACGC CACCGGCTAC
CTGCATGCCA ACCCGGCCGC CGGACTGTCC GCCGGCAGCC GCGCACGAAG CGGCTTTGTG
CCGACGCGGC TGATCCCGTC GGCACTGCTA GACGCGTGCG ATGCCTGGCT TGACGCAAAC
AGTGCCGGCG ATTTGTTGCC GGCGCTTCGC CAGCGTGCGA TTTGGGCGCT GTATCGCTAT
GCCGGCGTGC GCCTGGCGGA ACTGGCCTGG TCGGCCGAGA CTGCACTGCC CCGACTGGAG
GCCGAGGCGC CTGGGCGGTG GACGCTCTAT GTCTGCGGCA AGGGGCGCAA GGTACGAGCC
ATCCCGCTGC CGGCCCAGTG CATGGTCGTG CTGCGGGCCT ATCGGCGTGC CCGCGGCCTG
CCACCCGAGC CATCGGCGCA CGAAACATTG CCCGTGATCC ACGGCAGCAA GGGGGAAGCG
CTGCAGCAGA CGGGGCTCTA TCGGGAGATC AAGGCGATCT TCGCTGTCGT GGCCGATGGT
CTGCAGGCGC GCGAACCCGC AAAGGCGATG CTGCTGCGCG CCGCGTCGCC CCACTGGCTG
CGCCACGCCT ACGCACGTAC GCTGGTGGTC GACCACCAGG TGCCGCTGCC GGCCGCCCAG
GCGCTGCTTG GCCACGCCTC CGTACAAACC ACGGCAGCCT ACGCCAAGAC AGATCTGACG
CAATTGCGTG CCTTCGTCGA TGCCACGTTC GCTGATGATG TGCCCTAG
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| Protein sequence | MNPADWIDTG AVPPRPLPAK VDAALAYLAE ALGHPVYAHW TLTRIKRRYG SLADAKAAQP
TVLKLLLTHD GAVEYWERGR LRTAPADQAP SPDAVLARLL HTHRRRFRSA DASANAGAVP
ATAQTTGLVA NPWLAAHSHA DHAWLARTGR FAQPQAAANT LGAVDDAQAL ALFLRDRTGR
SSHTLRAYGA ELRRLMRWCG THGFGPFSDL TRQQLLAYRH TLEHGSSGTA NTTPPLSEAT
RTRALAVVAS LYGYWYATGY LHANPAAGLS AGSRARSGFV PTRLIPSALL DACDAWLDAN
SAGDLLPALR QRAIWALYRY AGVRLAELAW SAETALPRLE AEAPGRWTLY VCGKGRKVRA
IPLPAQCMVV LRAYRRARGL PPEPSAHETL PVIHGSKGEA LQQTGLYREI KAIFAVVADG
LQAREPAKAM LLRAASPHWL RHAYARTLVV DHQVPLPAAQ ALLGHASVQT TAAYAKTDLT
QLRAFVDATF ADDVP
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