| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6188 |
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| Symbol | |
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| ID | 4036626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 36422 |
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| End bp | 39391 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975214 |
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| Product | transposase Tn3 |
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| Protein accession | YP_581997 |
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| Protein GI | 94152595 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.480567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000297094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACGTC GTTCCATTCT GTCCGCCGCC GAGCGGGAAA GCCTGTTGGC GTTGCCGGAT
ACCAAGGACG ACTTGATCCG ATACTACACG TTCAGCGATA CCGACCTCTC CATCATCCGG
CAACGGCGCG GGCCTGCGAA CCGCTTGGGC TTTGCAGTTC AGCTCTGCTA CCTGCGCTTT
CCCGGCATCC TCCTTGGCGT CGATGAGCCG CCGTTTCCGC CCTTGCTGAA ACTGGTCGCC
GACCAGCTCA AGGTCAGTGT CGAAAGCTGG GGCGAGTACG GGCAGCGGGA GCAGACCCGG
CGCGAGCATC TGGTCGAGTT GCAAACGGTG TTCGGCTTCC AGCCCTTCAC CATGAGCCAC
TACCGGCAGG CCGTCCACAC GCTGACCGAG CTGGCCATGC AAACCGACAA GGGCATTGTG
CTGGCCAGCG CCTTGATCGA GCATCTGCGG CGGCAGTCGG TCATTCTGCC TGCCCTCAAC
GCCGTCGAGC GGGCGAGCGC CGAAGCGATC ACCCGCGCCA ACCGGCGCAT CTACTACGCC
TTGGCCGAAC CACTGTCGGA CGCGCATCGC CGCCGCCTCG ACGATCTGCT CAAGCGCCGG
GACAACGGCA AGACGACTTG GCTGGCCTGG CTGCGCCAGT CACCCGTCAA GCCCAATTCG
CGGCATATGC TGGAGCACAT CGAACGACTC AAGGCATGGC AGGCGCTCGA TCTGCCTACC
GGCATCGAGC GGCTGATCCA CCAAAACCGG CTGCTCAAGA TCGCCCGCGA GGGCGGCCAG
ATGACACCCG CCGACCTGGC CAAGTTCGAG GCGCAGCGGC GCTACGCGAC CCTGGTGGCG
CTCGCCATTG AAGGCATGGC CACCGTCACC GACGAAATCA TCGACCTGCA CGACCGCATC
CTGGGCAAGC TGTTCAACGC CGCCAAGAAC AAGCATCAGC AGCAGTTCCA GGCGTCCGGC
AAGGCGATCA ACGCCAAGGT GCGGCTGTTC GGGCGTATCG GTCAGGCACT GATCGAGGCC
AAGCAATCGG GCCGCGATCC GTTTGCCGCC ATCGAGGCCG TCATGTCCTG GGACGCCTTC
GCCGAGAGCG TCACCGAAGC GCAGAAGCTC GCGCAGCCCG AGGACTTCGA TTTCCTGCAC
CGCATCGGCG AGAGCTACGC CACGCTGCGT CGCTACGCGC CGGAATTCCT CGCCGTGCTC
AAGCTGCGGG CCGCGCCCGC TGCCAAGGAT GTGCTGGAGG CCATCGAAGT GCTGCGCAAC
ATGAACAGCG ACAACGCCCG CAAGGTGCCC GCCGACGCGC CAACCGATTT CATCAAGCCG
CGCTGGCAGA AGCTGGTGAT GACCGACACC GGCATCGATC GGCGCTACTA CGAACTGTGC
GCGCTGTCGG AGATGAAAAA CGCCCTGCGC TCCGGCGACA TCTGGGTGCA GGGATCGCGC
CAGTTCAAGG ACTTCGAGGA CTACCTGGTG CCACCCGCGA AATTCGCCAG CCTCAAGCAG
GCCAGCGAAT TGCCGCTGGC CGTGGCCACC GATTGCGACC AGTACCTGCA TGACCGGCTG
ACGCTGCTGG AAACGCAGCT CGCCACCGTC AACCGCATGG CGCTGGCCAA CGAGCTGCCG
GACGCCATCA TCACGGAGTC GGGCCTGAAG ATCACGCCGC TCGATGCGGC GGTGCCCGAC
ACCGCGCAGG CGCTGATCGA CCAGACAGCA ATGATCCTGC CGCACGTCAA GATCACCGAA
CTGCTGCTGG AGGTAGACGA ATGGACAGGC TTCACCCGGC ACTTCGCGCA CCTGAAATCG
GGCGACCTGG CCAAGGACAA GAACCTGCTG CTGACCACGA TCCTGGCCGA CGCCATCAAC
CTGGGTCTGA CCAAGATGGC GGAGTCCTGC CCCGGAACGA CCTACGCCAA GCTCGCCTGG
CTCCAAGCCT GGCATACCCG CGACGAAACC TATTCGTCGG CGCTGGCCGA ACTGGTCAAT
GCGCAGTTCC GGCATCCCTT CGCCGAGCAC TGGGGCGACG GCACCACGTC ATCGTCGGAC
GGCCAGAATT TCCGAACCGG CAGCAAGGCC GAGAGCACTG GCCACATCAA CCCGAAATAT
GGCAGCAGTC CTGGGCGGAC TTTCTACACC CACATCTCCG ACCAGTACGC GCCATTCCAC
ACCAAGGTGG TCAATGTCGG CGTGCGCGAC TCGACCTATG TGCTCGACGG CTTGCTGTAC
CACGAGTCCG ACCTGCGCAT CGAGGAGCAC TACACCGATA CGGCAGGATT CACCGATCAT
GTATTTGGCC TGATGCACCT GCTGGGCTTC CGCTTTGCGC CGCGCATCCG CGACCTGGGC
GACACCAAGC TGTTCATCCC CAAGGGCGAC ACCGTCTACG ACGCGCTCAA GCCGATGATT
AGCAGCGACA GACTGAACAT CAAGGCTATT CGCGCCCATT GGGATGAAAT TCTACGGCTG
GCCACGTCGA TCAAGCAGGG CACGGTGACG GCTTCGCTGA TGCTGCGCAA GCTCGGCAGC
TATCCGCGCC AGAACGGCCT GGCCGTGGCC CTGCGCGAGC TGGGGCGTAT CGAGCGCACG
CTGTTCATCC TGGATTGGTT GCAAAGCGTG GAGCTGCGCC GTCGCGTGCA CGCTGGGCTG
AACAAGGGCG AAGCCCGCAA TGCGCTGGCC CGCGCCGTGT TCTTCAACCG TCTGGGTGAA
ATCCGCGACC GCAGCTTTGA GCAGCAGCGC TACCGTGCCA GCGGCCTCAA CCTGGTGACG
GCGGCCGTCG TGCTATGGAA CACGGTCTAT CTGGAACGGG CTGCGCACGC GCTGCGGGGC
AACGGCCACG CCGTCGATGA CGCGCTGTTG CAGTACCTGT CGCCGCTCGG CTGGGAGCAC
ATCAACCTGA CCGGCGATTA CCTCTGGCGC AGCAGCGCCA AGATCGGCGC GGGCAAGTTC
AGGCCGCTGC GGCCGTTGCA ACCTGCTTAG
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| Protein sequence | MPRRSILSAA ERESLLALPD TKDDLIRYYT FSDTDLSIIR QRRGPANRLG FAVQLCYLRF
PGILLGVDEP PFPPLLKLVA DQLKVSVESW GEYGQREQTR REHLVELQTV FGFQPFTMSH
YRQAVHTLTE LAMQTDKGIV LASALIEHLR RQSVILPALN AVERASAEAI TRANRRIYYA
LAEPLSDAHR RRLDDLLKRR DNGKTTWLAW LRQSPVKPNS RHMLEHIERL KAWQALDLPT
GIERLIHQNR LLKIAREGGQ MTPADLAKFE AQRRYATLVA LAIEGMATVT DEIIDLHDRI
LGKLFNAAKN KHQQQFQASG KAINAKVRLF GRIGQALIEA KQSGRDPFAA IEAVMSWDAF
AESVTEAQKL AQPEDFDFLH RIGESYATLR RYAPEFLAVL KLRAAPAAKD VLEAIEVLRN
MNSDNARKVP ADAPTDFIKP RWQKLVMTDT GIDRRYYELC ALSEMKNALR SGDIWVQGSR
QFKDFEDYLV PPAKFASLKQ ASELPLAVAT DCDQYLHDRL TLLETQLATV NRMALANELP
DAIITESGLK ITPLDAAVPD TAQALIDQTA MILPHVKITE LLLEVDEWTG FTRHFAHLKS
GDLAKDKNLL LTTILADAIN LGLTKMAESC PGTTYAKLAW LQAWHTRDET YSSALAELVN
AQFRHPFAEH WGDGTTSSSD GQNFRTGSKA ESTGHINPKY GSSPGRTFYT HISDQYAPFH
TKVVNVGVRD STYVLDGLLY HESDLRIEEH YTDTAGFTDH VFGLMHLLGF RFAPRIRDLG
DTKLFIPKGD TVYDALKPMI SSDRLNIKAI RAHWDEILRL ATSIKQGTVT ASLMLRKLGS
YPRQNGLAVA LRELGRIERT LFILDWLQSV ELRRRVHAGL NKGEARNALA RAVFFNRLGE
IRDRSFEQQR YRASGLNLVT AAVVLWNTVY LERAAHALRG NGHAVDDALL QYLSPLGWEH
INLTGDYLWR SSAKIGAGKF RPLRPLQPA
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