| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6175 |
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| Symbol | merD |
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| ID | 4036437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 127156 |
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| End bp | 127521 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator MerD |
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| Protein accession | YP_581984 |
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| Protein GI | 94152577 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.00228488 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCT ACACGGTGTC CCGGCTGGCT CTTGATGCCG GGGTGAGCGT GCATATCGTG
CGCGACTACC TGCTGCGCGG ATTGCTGCGC CCGGTGGCGT GCACACCAGG CGGCTACGGC
TTGTTCGATG ACGCCGCCTT GCAACGGCTG TGCTTCGTGC GGGCGGCCTT CGAGGCGGGC
ATCGGCCTCG ACGCGCTGGC GCGGCTGTGC CGGGCGCTGG ATGCGGCGGA CGGCGACGAA
GCGGCCGCGC AGCTTGCCCT GCTGCGTCAG TTCGTCGAGC GTCGGCGCGA AGCGTTGGCC
GATCTGGAAG TGCAGTTGGC CACCCTGCCG ACCGAGCCGG CACAGCACGC GGAGAGTCTG
CCATGA
|
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| Protein sequence | MNAYTVSRLA LDAGVSVHIV RDYLLRGLLR PVACTPGGYG LFDDAALQRL CFVRAAFEAG
IGLDALARLC RALDAADGDE AAAQLALLRQ FVERRREALA DLEVQLATLP TEPAQHAESL
P
|
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| |