| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6136 |
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| Symbol | silA |
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| ID | 4036475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 163914 |
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| End bp | 167084 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | proton antiporter cation efflux protein SilA |
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| Protein accession | YP_581945 |
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| Protein GI | 94152538 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0754089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCA GTCTGATCCT TGCGTCCATC CGCAACCGCT TCCTGGTCCT TCTTGCCACG
GTGATGCTGA CCGCGTGGGG GCTTTGGGCC GTGCGAAGTA CGCCACTGGA TGCCCTGCCC
GACCTCTCCG ACGTGCAGGT CATCATTCGC ACCCCATTCC CTGGGCAGGC TCCCCAGATT
GTGGAGAACC AGGTCACCTA TCCGCTGACC ACCACGATGC TGTCGGTGCC CGGCGCGAAG
ACCGTGCGCG GATACTCGTT CTTCGGCGAC TCCTATGTCT ACGTATTGTT CGAGGACGGC
ACCGACCTGT ACTGGGCCCG TTCACGCGTT CTTGAGTACT TGAACCAGGT CCAGTCCCGG
CTGCCGGCCG CCGCCAAGCC TGCGCTTGGT CCCGACGCTA CCGGCGTGGG TTGGGTCTAT
GAGTACGCGC TCGTGGACAA GAGCGGACAG CATGACCTGT CACAGCTGCG CGCCCTTCAG
GACTGGTTCT TGCGATTTGA GCTCAAGTCC TTGCCCAATG TCGCAGAGGT TGCCTCGTTG
GGCGGGATGG TCAAGCAGTT CCAAATTGTG CTGTTGCCCG ACCGGCTTCG CGCCTACAAC
CTGTCACAAG GGAAGGTGCT GGCCGCACTC AAGGGGGCCA ATCAGGAAAC CGGGGGCTCA
GTATTGGAAC TGGGTGAAGC CGAATACATG GTGCGCGCTA CCGGGTACCT GAAGACGCTG
GATGACTTTC GGCAGGTGCC GATCGTGACG AGCGACGCCG GTATTCCGGT CAGACTGGGC
GATGTCGCCG TGATTCAACT GGGCCCAGAG ATGCGCCGCG GCATCGCGGA GCTCAACGGC
CAAGGCGAAG TCGCGGGCGG GGTCATTATC CTGCGATCGG GGAAGAACGC GCTGGAGACG
ATCAACGCCG TCAAGGCCAA ACTGCAGACC TTGCAGAAAA GCCTGCCTGA CGGCGTCGAG
GTCGTCACCG TCTACGACCG GTCGGCGCTG ATCAGTCGCG CAGTCGACAA CCTCACCACC
AAGCTGCTGG AGGAGTTTGC GGTCGTCGCA GTGGTCTGCC TGCTCTTTCT CTTTCACTTG
CGCTCGGCAC TGGTCGCCAT CATCTCGTTG CCGCTTGGCG TGCTGGCGGC ATTCCTTGTC
ATGCGCTATC AGGGCGTGAA CGCCAACATC ATGTCACTGG GGGGTATTGC AATCGCAGTC
GGCGCGATGG TCGACGCCGC GGTCGTCATG ATCGAGAACG CCCATAAGCA CCTGGAACAC
TGGCACGTCA AGCATCCACA GCAAGAACTT GAGGCGCAAG AGCGATGGCG CCTTATCGGT
GAGTCGGCCG CAGAGGTCGG TCCTGCCCTG TTCGTCTCAT TGCTGATCAT CACCCTGTCG
TTCATTCCAG TCTTTACCCT GGAGGCACAG GAGGGCAGGT TGTTCTCGCC ATTGGCGTTC
ACCAAAACCT ACTCCATGGC GGCGGCGGCG GGTCTCTCCG TCACATTGAT CCCCGTGCTA
ATGGGCTATA TGATTCGTGG CAAGATCCCT TCCGAGCAAG CCAATCCTCT CAACCGCCTG
CTGATCCGCG CTTATCACCC GCTGCTCAAC AAGGTGCTCA GGTACCCCAA GACCACCGTG
GCGCTGGCGG GCGTGCTCCT GGTTGCGACC GCCTGGCCCA TCATGCGCAC TGGCGGGGAA
TTCATGCCAC CGCTGGACGA AGGCGATCTG CTCTACATGC CCTCCGCTCT GCCAGGGCTT
GCGGCCGGCA AGGCGTCGCA GTTGCTGCAA CAGACCGACC GGCTGATCAA GACGGTCCCT
GAAGTGGCGT CCGTGTTTGG CAAAGCCGGC CGCGCCGACA GTGCGACGGA CCCCGCGCCG
ATTGAGATGT TCGAGACGAC CATTCGCTTT AAGCCGAAGG ATCAGTGGCG TCCCGGCATG
ACAACCGACA AGCTGGTCGA AGAATTGGAC CGCATTGTCA AGGTACCGGG CCTGTCCAAT
ATCTGGGTAC CGCCGATCCG CAATCGCATT GACATGCTCG CGACCGGCAT CAAGAGTCCC
GTGGGTATCA AGGTCGCCGG CACGGACCTC AAGGAGATCG ACAGACTCGC CACACGTATT
GAAGAGGCCG TCAAGACAGT CCCCGGCGTG ACATCTGCGC TGGCCGAACG GCTCACGGGC
GGGCGCTACA TCGATGTCGA CATCGACCGC GCGGCAGCAG GCCGCTACGG TCTGAACATC
GAGGACGTCC AATCGATTGT TTCCTCGGCC ATCGGGGGTG AAACCGTTGG TGAGGTGGTC
GATGGACTCG CACGATTCCC CATCAACGTT CGGTATCCGC GCGACGATCG GGACTCCATC
GATGCACTGC GGCGCCTGCC AATTGTGACC GACAGCGGCT TACAGATTGC GCTGGCCGAT
GTGGCCCGCA TTACTGTCAT GCAGGGCCCA CCGATGTTGC GCAGTGAGAA CGCACGTCTT
TCCGGTTGGG TATATGTTGA CATTCGCGGC AGAGATCTTC GGTCCACCGT GCGTGACATG
CAGGCCGCCG TGGCGAAGGC CGTACCAATG CCCGCCGGGT ATGCCCTCAG TTGGTCAGGC
CAGTTCGAGT ATCTGGAGCG TGCTACGGCC AAACTCAAGG TCGTCGTCCC CTTTACCTTG
CTGATCATCT TCGTACTGCT CTATCTAGTT TTCGGCCGGC TGGATGAAGC CATGCTGATC
ATGGGCACGC TCCCCTTGGC CCTAATAGGC GGCTTCTGGC TGCTGTATCT GTTGCGCTAC
AACCTCTCTG TGGCTGGGAT AGTTGGGTTC ATCGCGCTTG CGGGTGTGGC CGCAGAGTTC
GGCGTCATCA TGCTGCTGTA TCTCAAGCAC GCGTGGCACG ACCGGTTGGC GCGCGGTGAA
GATACGCTAG ATGCGTTGCT CGACGCCATC CAGGAGGGTG CGGTATTGCG CGTCCGGCCG
AAGGCGATGA CGGTGGCGGT CATCCTGGCG GGCCTGATTC CGATCATGTG GTCACATGGC
ACAGGGTCTG AGGTCATGCA ACGGATTGCT GCGCCAATGG TGGGTGGCAT GGTGACAGCG
CCGCTGCTAT CGATGTTCGT CGTGCCCGCC GTATATCTGT TGCTGCGCCG GCGCTTGTTG
CCCTCGCCCT CCACCACCGC CAAGCAGGCA GAACTGGAGC GGGCCGTGTA G
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| Protein sequence | MIASLILASI RNRFLVLLAT VMLTAWGLWA VRSTPLDALP DLSDVQVIIR TPFPGQAPQI
VENQVTYPLT TTMLSVPGAK TVRGYSFFGD SYVYVLFEDG TDLYWARSRV LEYLNQVQSR
LPAAAKPALG PDATGVGWVY EYALVDKSGQ HDLSQLRALQ DWFLRFELKS LPNVAEVASL
GGMVKQFQIV LLPDRLRAYN LSQGKVLAAL KGANQETGGS VLELGEAEYM VRATGYLKTL
DDFRQVPIVT SDAGIPVRLG DVAVIQLGPE MRRGIAELNG QGEVAGGVII LRSGKNALET
INAVKAKLQT LQKSLPDGVE VVTVYDRSAL ISRAVDNLTT KLLEEFAVVA VVCLLFLFHL
RSALVAIISL PLGVLAAFLV MRYQGVNANI MSLGGIAIAV GAMVDAAVVM IENAHKHLEH
WHVKHPQQEL EAQERWRLIG ESAAEVGPAL FVSLLIITLS FIPVFTLEAQ EGRLFSPLAF
TKTYSMAAAA GLSVTLIPVL MGYMIRGKIP SEQANPLNRL LIRAYHPLLN KVLRYPKTTV
ALAGVLLVAT AWPIMRTGGE FMPPLDEGDL LYMPSALPGL AAGKASQLLQ QTDRLIKTVP
EVASVFGKAG RADSATDPAP IEMFETTIRF KPKDQWRPGM TTDKLVEELD RIVKVPGLSN
IWVPPIRNRI DMLATGIKSP VGIKVAGTDL KEIDRLATRI EEAVKTVPGV TSALAERLTG
GRYIDVDIDR AAAGRYGLNI EDVQSIVSSA IGGETVGEVV DGLARFPINV RYPRDDRDSI
DALRRLPIVT DSGLQIALAD VARITVMQGP PMLRSENARL SGWVYVDIRG RDLRSTVRDM
QAAVAKAVPM PAGYALSWSG QFEYLERATA KLKVVVPFTL LIIFVLLYLV FGRLDEAMLI
MGTLPLALIG GFWLLYLLRY NLSVAGIVGF IALAGVAAEF GVIMLLYLKH AWHDRLARGE
DTLDALLDAI QEGAVLRVRP KAMTVAVILA GLIPIMWSHG TGSEVMQRIA APMVGGMVTA
PLLSMFVVPA VYLLLRRRLL PSPSTTAKQA ELERAV
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