| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6134 |
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| Symbol | silC |
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| ID | 4036473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 168643 |
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| End bp | 169950 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | proton antiporter metal efflux protein SilC |
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| Protein accession | YP_581943 |
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| Protein GI | 94152536 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.144513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTGC GTTTTCCCCT AGCGCGCGGG CGGCGGTGGT CGCTCGCCCT CTCGCTCATC
GCGGCCGCCC ATCCCGGATG GGCGCAATCG GCCGCACCCC TGTCGTTGCA GGAAGCCGTG
GTGCTCGCCT CGGCGCATGC CTCGGACGCT GAGACGTCGC GCGCAGCAAT CCAATCCGCC
TTGGAAATGG CGGTTGCGGG CAGGCAACTG CCGGACCCGG TTCTCAAGGT TGGCGTCAAC
AACGTGCCCG CCGATGGACG GGATCGCTTC TCAATCGGCA CGGAATCGAT GACGATGCGC
TCGATCAGCG TGATGCAGGA ACTGACGCGA TCAGCCAAGC GTGAAGCGCG CGCACGACGC
TTCGAGGCCG AGGCCTCGTC GGCGCAGGCG CAACGCACGG CCGCGCTCGC CGCCGTACAG
CGTGGCGCGG CACAGGCGTG GCTCGATCGG CTCTATGCCG AGCGGGCAAC CGTCGTGCTG
GCGGAACAGG CGCAGTCCAT CGGGCTGATG ATCGACGCTG CCCGCGCTGC CTATCGTGGC
AACCGCGGCC CCCGGACCGA TATCCTGACC GCTGAACTTG AGTTGCAGCA ATTGCGCGAC
CGGGAGGACG AGGCGCGCGC CGCTGTGTCG ACAGCCAGAG CAATGCTGCA GCGCTGGGTC
GGTGACGCCG CCGTGCGCCC CCTGGGTGAC AGTCCGACGC TTGCGATACC CGCGTGGCTC
GCCAATCTCG ATGGCAGCGT CGTGTCCCAG TTGCCCGATG TGGCCACCGC CGAGGCCCAG
GTCGGCGTCG CGGAGGCCGA GGGCAGCGTG GCGCGGGAAA ACAGGATTCC GGACGTCAGC
GTGGAGTTGA TGTACAGCCA GCGCGGCCCA GCGTACTCGA ACATGGTTTC GGTCAACCTA
TCCCTGCCTT TGCCCTGGGA TCGGAAGAAC CGGCAAGATC GTGAGCTCGC CGCGAAGCTC
TCACAGGCCG ATGCAGCGCG AGCCCAAGCC GAAGCGGTTC GACGTGGGCT ACAGGGCCAA
CTGCGCGGCA AGCGAGCCGA ACTCGGCCTG AACCAGTCGC GGCTGGAACG TTATCGCGAC
GTCACGGTGC CGCTGGCCAG AACGCAGACA GAAGCAGCAC TGACGGCGTA TCGCGCCGGT
GCCGGCACGC TCTCCGCAGT CGCCGACGCG AGCCGCAAAG CGCTCAATCT CTCGCTGGAA
CGCCTGAAGT TGGAGGCCGC GACGGCCCGG CTGTGGGCCG AGCTCAATTT CCTGATGCCG
CTTGCGACTG AAGCAATGCC GGCATCCACG CAAGGGGATC AACCATGA
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| Protein sequence | MFLRFPLARG RRWSLALSLI AAAHPGWAQS AAPLSLQEAV VLASAHASDA ETSRAAIQSA
LEMAVAGRQL PDPVLKVGVN NVPADGRDRF SIGTESMTMR SISVMQELTR SAKREARARR
FEAEASSAQA QRTAALAAVQ RGAAQAWLDR LYAERATVVL AEQAQSIGLM IDAARAAYRG
NRGPRTDILT AELELQQLRD REDEARAAVS TARAMLQRWV GDAAVRPLGD SPTLAIPAWL
ANLDGSVVSQ LPDVATAEAQ VGVAEAEGSV ARENRIPDVS VELMYSQRGP AYSNMVSVNL
SLPLPWDRKN RQDRELAAKL SQADAARAQA EAVRRGLQGQ LRGKRAELGL NQSRLERYRD
VTVPLARTQT EAALTAYRAG AGTLSAVADA SRKALNLSLE RLKLEAATAR LWAELNFLMP
LATEAMPAST QGDQP
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