Gene Rmet_6060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6060 
SymbolrepA 
ID4036614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp3486 
End bp4823 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content55% 
IMG OID 
Productplasmid replication protein 
Protein accessionYP_581869 
Protein GI94152462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATC TCCCAAAAAA CATCCAGGAG CAGCTGGGTT TCGATATCTT CAACGCTGTC 
CGCGAGGAGC TCGGGCCTAG TACCGCAATC ACTGAATCCA CGCGCGACAT TGGGTACCGC
AAAACCAATG TTCTGATTGA CGTCACCCCT ATGTCCCTCG TGGCAAGGCG GGCCATCAAT
GCGTTGTGGC TCACGGTGTC GGAGAACCCG GATCTTGAGC ATTACGATAT CGAGCTCGGC
TACTTCAAAT GGCTCGCTAA GTTCGAAACA TCGAACAACG TCGCGCACCT CAAGAAGGCC
CTGCGCGAGT GCCAGAGCTC ATCGGTTCAA GTCTCTGTTG AGCGCAAGGG CGGCGGCGAC
CCGCAATGGG TGTCAGTGCC GCTTCTTGGT TCTGTAGGGA TCGCAGGCGG GCGCGTTGTG
TTCAAGGTCG ACGAGATGAT CCGTCGACAA CTCAAAGATC CGAAGCGCTA TACCTATCTA
TCCTTGCGCA TGTCTGCGGC ACTCAGCCAG TACGCGTACA TCCTGTATGA GCGTTTGGGC
GCCCTTCGAT TCATGGGGAC TACGAACTGG CTTCCGATCG AAGAGGTCAG GAAGTGGGTC
AATGCTGACG CGGTCAAATC ACTCACCGAG TACAAGCAGT TCAAGCGGTT GGTTCTGGAT
AAGAACATTG CCCAAATCAA TGAACTGACC GATCTCTACG TTGAGTACGA AACGAAGACC
GCGCAGGGTT CGCGACGCGT TGCGGCGATT CGATTCAAGC TTAGGGACAA CGCAGAGGGC
AAGCTCGTTC TGGACTTTGC GCAACCACAT GAGCTGAAGG ATCTGTATGA GACTCTCGTT
AAGGGCTTTG GGCTGAGCAC CAGGCAGATC AATGAGATCA TCAGCAATCG CGAAGTGAAC
ACGGATGAGC GAATCCGTGC GGCGATTGAG CTCGTGAGGT ACCGAGTCAA AGTTGGAGGG
GTGAAATCGC CTGGTGCCTA CCTAATGACC GCGATCAAAG AGGGTTGGGC ACTTAGCGAA
ATGGAGCGCG AGGCGGCGTT TGGTAGCCCA GCCGAAGCAG TCCCGAGTAA GCCAATGGTA
CCGGTCGCTG AGATCGAGTT TGCGCGCAAT CTTGAGCGCG ATATCGAAGA AGGTCTGGCT
ATCTTCGCCT CGATGACGGA CGACGAACGA CTTGCTGTCC TTGATGGACT GTACAAGGAG
ACTACGTTCC AGATGGCTGC GCGGCGGCAG AAGGTAAAGG CTAGGCCGGA TGAGGCGGCA
ATCATGGCTC GTAAGGCACT GAAGGTCGAA CTGGCCCAAT ACGTGAAGCG ACAGGCAGAG
GAACAGAAGG CTGCCTGA
 
Protein sequence
MSNLPKNIQE QLGFDIFNAV REELGPSTAI TESTRDIGYR KTNVLIDVTP MSLVARRAIN 
ALWLTVSENP DLEHYDIELG YFKWLAKFET SNNVAHLKKA LRECQSSSVQ VSVERKGGGD
PQWVSVPLLG SVGIAGGRVV FKVDEMIRRQ LKDPKRYTYL SLRMSAALSQ YAYILYERLG
ALRFMGTTNW LPIEEVRKWV NADAVKSLTE YKQFKRLVLD KNIAQINELT DLYVEYETKT
AQGSRRVAAI RFKLRDNAEG KLVLDFAQPH ELKDLYETLV KGFGLSTRQI NEIISNREVN
TDERIRAAIE LVRYRVKVGG VKSPGAYLMT AIKEGWALSE MEREAAFGSP AEAVPSKPMV
PVAEIEFARN LERDIEEGLA IFASMTDDER LAVLDGLYKE TTFQMAARRQ KVKARPDEAA
IMARKALKVE LAQYVKRQAE EQKAA