Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6060 |
Symbol | repA |
ID | 4036614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | - |
Start bp | 3486 |
End bp | 4823 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | plasmid replication protein |
Protein accession | YP_581869 |
Protein GI | 94152462 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTAATC TCCCAAAAAA CATCCAGGAG CAGCTGGGTT TCGATATCTT CAACGCTGTC CGCGAGGAGC TCGGGCCTAG TACCGCAATC ACTGAATCCA CGCGCGACAT TGGGTACCGC AAAACCAATG TTCTGATTGA CGTCACCCCT ATGTCCCTCG TGGCAAGGCG GGCCATCAAT GCGTTGTGGC TCACGGTGTC GGAGAACCCG GATCTTGAGC ATTACGATAT CGAGCTCGGC TACTTCAAAT GGCTCGCTAA GTTCGAAACA TCGAACAACG TCGCGCACCT CAAGAAGGCC CTGCGCGAGT GCCAGAGCTC ATCGGTTCAA GTCTCTGTTG AGCGCAAGGG CGGCGGCGAC CCGCAATGGG TGTCAGTGCC GCTTCTTGGT TCTGTAGGGA TCGCAGGCGG GCGCGTTGTG TTCAAGGTCG ACGAGATGAT CCGTCGACAA CTCAAAGATC CGAAGCGCTA TACCTATCTA TCCTTGCGCA TGTCTGCGGC ACTCAGCCAG TACGCGTACA TCCTGTATGA GCGTTTGGGC GCCCTTCGAT TCATGGGGAC TACGAACTGG CTTCCGATCG AAGAGGTCAG GAAGTGGGTC AATGCTGACG CGGTCAAATC ACTCACCGAG TACAAGCAGT TCAAGCGGTT GGTTCTGGAT AAGAACATTG CCCAAATCAA TGAACTGACC GATCTCTACG TTGAGTACGA AACGAAGACC GCGCAGGGTT CGCGACGCGT TGCGGCGATT CGATTCAAGC TTAGGGACAA CGCAGAGGGC AAGCTCGTTC TGGACTTTGC GCAACCACAT GAGCTGAAGG ATCTGTATGA GACTCTCGTT AAGGGCTTTG GGCTGAGCAC CAGGCAGATC AATGAGATCA TCAGCAATCG CGAAGTGAAC ACGGATGAGC GAATCCGTGC GGCGATTGAG CTCGTGAGGT ACCGAGTCAA AGTTGGAGGG GTGAAATCGC CTGGTGCCTA CCTAATGACC GCGATCAAAG AGGGTTGGGC ACTTAGCGAA ATGGAGCGCG AGGCGGCGTT TGGTAGCCCA GCCGAAGCAG TCCCGAGTAA GCCAATGGTA CCGGTCGCTG AGATCGAGTT TGCGCGCAAT CTTGAGCGCG ATATCGAAGA AGGTCTGGCT ATCTTCGCCT CGATGACGGA CGACGAACGA CTTGCTGTCC TTGATGGACT GTACAAGGAG ACTACGTTCC AGATGGCTGC GCGGCGGCAG AAGGTAAAGG CTAGGCCGGA TGAGGCGGCA ATCATGGCTC GTAAGGCACT GAAGGTCGAA CTGGCCCAAT ACGTGAAGCG ACAGGCAGAG GAACAGAAGG CTGCCTGA
|
Protein sequence | MSNLPKNIQE QLGFDIFNAV REELGPSTAI TESTRDIGYR KTNVLIDVTP MSLVARRAIN ALWLTVSENP DLEHYDIELG YFKWLAKFET SNNVAHLKKA LRECQSSSVQ VSVERKGGGD PQWVSVPLLG SVGIAGGRVV FKVDEMIRRQ LKDPKRYTYL SLRMSAALSQ YAYILYERLG ALRFMGTTNW LPIEEVRKWV NADAVKSLTE YKQFKRLVLD KNIAQINELT DLYVEYETKT AQGSRRVAAI RFKLRDNAEG KLVLDFAQPH ELKDLYETLV KGFGLSTRQI NEIISNREVN TDERIRAAIE LVRYRVKVGG VKSPGAYLMT AIKEGWALSE MEREAAFGSP AEAVPSKPMV PVAEIEFARN LERDIEEGLA IFASMTDDER LAVLDGLYKE TTFQMAARRQ KVKARPDEAA IMARKALKVE LAQYVKRQAE EQKAA
|
| |