Gene Rmet_5998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5998 
SymbolatsH 
ID4036533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp59115 
End bp60359 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content57% 
IMG OID 
Productmetal-dependent hydrolase 
Protein accessionYP_581807 
Protein GI94152400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.403033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGATT GTATTGGCCA AGCGCTTGAG CTTGGAATGA GCCGCCGTGG TTTTTTTAAG 
TCTGGATGGA AACTCGCAGG TGCGGCTGGA CTGCCACTAC TGGTCGGGCA GCCCTTAAAT
GCCGCGGAGG TGTCCAAGCG TGAAGCAGCG GTTTCCGCAT CGAAAGTTGC AGCACAGCAG
TTCGATACGC GGTTGGTCCT GCTTGGCACT GCCGGCGGGC CAGTTTGGTG GCCGAATTGT
GACCGAGAAG GCATTTCATC GGCCCTGGTC GTAGGCGATG CCGTCTATGT CGTCGACTGT
GGCGACGGCG TCGGCAAGCG ATATAAGCAG GCTGGATTGG GACAAAATAA CTTGGTGTCT
GGCATGTCCG GTATGGAAAA TCTGCGAGGC ATCTTTCTGA CGCACCTGCA CTCCGACCAT
ACGGTTGATT ACTTCAACCT GTTCCTCTTT GGCTGGTATA ACGGCCTGAC CGGGGTGAAG
CAGCCGGTGC ACGTCTATGG ACCGGGACCG CGCGGCCAAC TGGAGCCGAT CTTCACGCCT
CCGGGGCAGC CTCCCCGGAA AGAGCCGGCA CTGGTCAATC CTGAAAATCC CACGCCTGGT
ACGGTCGATA TGACCAATTA TCTTTACCAA GCGTTCGCGG TCGATATCAA CGACAGGCTG
CGAGATGCCG GCCGGCAGGA CCTGCGTGAC CTCATCAAGG TGCACGACAT CAAACTGCCG
CACATACCGG GCTTCAAGAG CCCGAATGAA ACCCCCGAAC CCGAAATGGC ACCGTTCGTC
GTCCATGAGG ACGATCGCGT CCGCGTGTCC GCCACGCTCG TCAACCATTT CCCTATCTGG
CCGGCTTACG CTTACCGCTT TGATACCGAT GATGGGTCGG TGGTCTTTTC CGGTGACACA
TGCCCGAGCA AGAATTTGAT TCGGCTTGCC AAGGACGCAG ATGTCCTTGT CCATGAGGTG
ATAGATGTCG CATGGGTAGA CGCTTTGTTT CCGCCGCCCG TCACAGCCAA GGAGGAGGCG
TTCAAAAACC ACCTGCTCAG CTCCCACACA TCAATCGACG ACGTTGGTAA AGTCGCGGAG
GCGGCAGGTG CCAAAACGCT CGTATTGTCG CATATCGCGC CGGGCCATGC GCCGAAAGAG
AACCTATTGC GCGCTCAACG CAACTTCTCC GGCCAATTGA TTGTCGGCGA TGACCTCATG
CAAATCGGCG TAGGGCGGAA GCGCTCCCAA CGAAGGAAAG CCTAA
 
Protein sequence
MCDCIGQALE LGMSRRGFFK SGWKLAGAAG LPLLVGQPLN AAEVSKREAA VSASKVAAQQ 
FDTRLVLLGT AGGPVWWPNC DREGISSALV VGDAVYVVDC GDGVGKRYKQ AGLGQNNLVS
GMSGMENLRG IFLTHLHSDH TVDYFNLFLF GWYNGLTGVK QPVHVYGPGP RGQLEPIFTP
PGQPPRKEPA LVNPENPTPG TVDMTNYLYQ AFAVDINDRL RDAGRQDLRD LIKVHDIKLP
HIPGFKSPNE TPEPEMAPFV VHEDDRVRVS ATLVNHFPIW PAYAYRFDTD DGSVVFSGDT
CPSKNLIRLA KDADVLVHEV IDVAWVDALF PPPVTAKEEA FKNHLLSSHT SIDDVGKVAE
AAGAKTLVLS HIAPGHAPKE NLLRAQRNFS GQLIVGDDLM QIGVGRKRSQ RRKA