| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5995 |
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| Symbol | mhpD |
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| ID | 4036530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 62766 |
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| End bp | 63644 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_581804 |
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| Protein GI | 94152397 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG CAACGCTCCA AACCGCGCAA GGGAAGCTCG TTTCCCTGGT AAACACTGAG
TCGCAGCAGT ATTGGCCGCT CCAGGATCTG GTTTCTGGGT TCACCGGGGA CATGGTCCAA
TTGGTTCATG TTTTCCCGGA AATTAAGGGC CGCTTGACGC CCACCGGCGA AGGCAAGCCC
CTCTCGCAGG CGACGGTGCT CGCCCCGATC GACCAGCCGC GCCGCAATAT CTTCTGCGTC
GGCAAGAACT ACCATGAGCA CGCGAAAGAA TTCTCGAAAT CCGGCTTCGA CAGCAGCGCC
AAGGAGGGTG AGCACGCCCC GGAAGCGCCG GTTGTCTTTA CAAAGCCCGC CTCGACGGTC
ATCGGCCCGG GCAAGAAAGT ACCGAGCCAC CCGAACGTGA CGAAGCAACT AGACTACGAG
GCAGAACTGG CAGTCGTCAT CGGCAAGGCT GGCCGTGCGA TCCGCAAGGA AGAGGCGTAC
AAGCATGTCA TCGGCTACAC CATCGTGAAT GACTTCACCG CCCGCGACCT GCAGAAGACG
CACCGACAGT GGTTCCTTGG CAAGTCATTG GACGGCTTCT GCCCAATGGG CCCGTATCTC
GTCACGGCAG ATGAACTCGA CGTCGAAAAT CTTGAAGTGA AGTGCTGGAT CAACGACGAA
CTGCGCCAGG ACTCCAACAC CAGCCAGCTC ATTTTCGACA TTCCCACGCT TATTGAGACT
CTCTCTGCCG GCATCGAACT GCAGCCCGGC GATGTCATCG CAACAGGCAC CCCCGCAGGC
GTCGGCATTG GCTTCAACCC GCCGAAGTTT GTAAAGGCCG GCGATGTCAT GCGCATTGAG
ATCACGGGCC TGGGCACCCT GGTCAACGAG GTGGAGTAA
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| Protein sequence | MKFATLQTAQ GKLVSLVNTE SQQYWPLQDL VSGFTGDMVQ LVHVFPEIKG RLTPTGEGKP
LSQATVLAPI DQPRRNIFCV GKNYHEHAKE FSKSGFDSSA KEGEHAPEAP VVFTKPASTV
IGPGKKVPSH PNVTKQLDYE AELAVVIGKA GRAIRKEEAY KHVIGYTIVN DFTARDLQKT
HRQWFLGKSL DGFCPMGPYL VTADELDVEN LEVKCWINDE LRQDSNTSQL IFDIPTLIET
LSAGIELQPG DVIATGTPAG VGIGFNPPKF VKAGDVMRIE ITGLGTLVNE VE
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