| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5980 |
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| Symbol | czcA |
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| ID | 4036515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | + |
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| Start bp | 78452 |
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| End bp | 81643 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | heavy metal resistance protein CzcA |
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| Protein accession | YP_581789 |
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| Protein GI | 94152382 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000345716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.120659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAC GTATCATTAG TTTCGCCATC CAGCAGCGAT GGCTGGTCCT GCTCGCCGTG
TTTGGAATGG CCGGGTTAGG GATTTTCAGC TACAACCGAC TACCGATCGA CGCGGTCCCT
GACATTACCA ACGTTCAGGT TCAGGTCAAT ACCTCGGCAC CAGGCTATTC ACCGCTCGAA
ACCGAACAGC GTGCTACGTA TCCGATCGAG GTCGTGATGG CCGGCCTGCC GGGACTCGAA
CAGACGCGTT CCCTGTCCCG CTATGGCTTG TCGCAGGTGA CGGTCATCTT CAAGGATGGC
ACGGACGTCT ATTTCGCGCG CCAACTCGTC AACCAGCGCA TCCAGGAAGC CAAGGACAAT
CTGCCTGAAG GCGTTGTGCC GGCGATGGGG CCTATTTCGA CCGGCCTCGG GGAGATCTAT
CTATGGACCG TTGAAGCCGA AGAGGGTGCT CGCAAAGCTG ACGGGACTGC CTATACGCCG
ACAGATTTGC GCGAAATCCA GGATTGGGTG GTACGGCCGC AACTGCGTAA CGTGCCCGGT
GTCACCGAGA TCAATACTAT CGGTGGTTTC AACAAGCAGT ACCTGGTCGC GCCGAGTCTT
GAACGGCTAG CGTCGTACGG GCTGACGCTG ACCGACGTCG TCAATGCGCT GAACAAGAAC
AACGACAACG TGGGTGCGGG CTACATCGAG CGTAGGGGCG AGCAGTATCT GGTTCGTGCG
CCGGGTCAGG TTGCGTCCGA AGACGACATC CGCAACATTA TTGTCGGTAC AGCGCAGGGG
CAGCCGATCC GCATTCGCGA CATCGGGGAT GTGGAGATTG GCAAGGAACT GCGTACCGGT
GCGGCAACCG AGAATGGCAA GGAAGTTGTG CTGGGCACGG TATTCATGCT CATCGGCGAA
AACAGCCGGG CTGTGTCAAA AGCGGTCGAT GAAAAGGTCG CTTCCATTAA CCGTACGATG
CCGGAAGGTG TGAAGATCGT AACGGTATAC GACCGGACAC GTCTGGTCGA CAAGGCCATT
GCGACCGTCA AGAAGAACCT TCTTGAAGGC GCGGTGCTCG TCATCGTAAT TCTGTTCCTT
TTCCTGGGTA ACATCCGCGC GGCGCTGATT ACCGCGACGA TCATTCCGCT GGCGATGTTG
TTCACCTTCA CGGGGATGGT GAACTACAAG ATCAGTGCGA ACCTGATGAG CTTGGGCGCG
CTCGACTTCG GCATCATCAT CGATGGCGCG GTGGTGATTG TCGAAAACTG TGTGAGGCGA
CTGGCGCATG CGCAGGAACA CCATGGCCGG CCATTGACGC GCTCCGAGCG GTTCCATGAG
GTGTTTGCCG CAGCGAAGGA GGCGCGTCGC CCACTGATCT TCGGTCAGCT CATCATTATG
ATCGTCTACC TGCCGATCTT TGCGCTGACG GGGGTGGAAG GCAAGATGTT CCACCCGATG
GCGTTCACGG TCGTCCTGGC GCTGCTGGGC GCGATGATTC TGTCCGTGAC GTTCGTTCCG
GCTGCGGTCG CCTTGTTCAT CGGCGAACGG GTGGCCGAGA AAGAAAATCG TCTCATGCTC
TGGGCGAAGC GTCGCTACGA GCCGCTGCTG GAAAAGTCGC TCGCGAACAC GGCCGTTGTA
TTGACGTTTG CCGCGGTGTC AATTGTTCTG TGCGTGGCCA TTGCGGCCCG CCTGGGCAGC
GAGTTCATCC CCAATCTGAA CGAAGGCGAC ATTGCCATCC AGGCGCTGCG CATTCCTGGC
ACGAGCCTGT CGCAGTCCGT GGAGATGCAG AAGACGATCG AGACGACCCT CAAGGCAAAA
TTCCCCGAAA TCGAGCGCGT GTTTGCGCGG ACAGGTACGG CGGAGATTGC ATCCGATCTG
ATGCCGCCGA ATATTTCGGA TGGCTACATC ATGCTCAAGC CTGAGAAGGA TTGGCCAGAG
CCGAAGAAAA CACATGCCGA ACTGCTGTCC GCCATCCAGG AGGAAGCCGG CAAGATCCCC
GGGAACAACT ACGAGTTCTC CCAACCGATC CAGCTGCGGT TCAACGAGCT GATCTCCGGG
GTCCGCTCGG ACGTCGCAGT CAAGATCTTC GGCGATGACA ACAACGTGCT CAGCGAGACG
GCGAAGAAGG TATCGGCCGT GCTGCAGGGC ATCCCCGGCG CGCAGGAGGT GAAGGTAGAA
CAGACCACCG GCTTGCCGAT GCTGACGGTC AAGATCGATC GGGAGAAGGC GGCGCGATAC
GGGCTTAACA TGAGCGACGT GCAAGACGCG GTGGCAACGG GCGTCGGAGG CCGTGATTCC
GGAACCTTCT TCCAGGGCGA TCGTCGTTTC GATATCGTGG TCCGCCTGCC CGAAGCTGTG
CGCGGCGAGG TCGAGGCTCT GCGCCGATTG CCGATTCCGT TGCCAAAAGG AGTGGACGCG
AGAACGACGT TTATCCCATT GAGCGAGGTG GCGACGCTGG AAATGGCGCC CGGCCCGAAC
CAGATCTCGC GCGAGAACGG CAAGCGCCGC ATCGTGATCA GTGCCAACGT TCGTGGACGT
GATATTGGTT CATTCGTGCC CGAGGCGGAA GCGGCTATCC AAAGCCAGGT CAAGATCCCG
GCTGGCTACT GGATGACATG GGGTGGCACC TTTGAGCAAC TGCAGTCCGC CACCACCCGC
CTGCAGGTGG TAGTGCCGGT GGCGCTGTTG CTGGTCTTCG TACTGTTGTT TGCGATGTTC
AACAACATCA AGGATGGCTT GCTAGTCTTC ACGGGCATTC CCTTTGCGCT GACTGGCGGG
ATTCTTGCCC TGTGGATACG CGGCATTCCG ATGTCCATTA CTGCAGCGGT GGGCTTCATC
GCGCTGTGCG GGGTGGCGGT GCTCAATGGT CTGGTGATGC TGTCGTTTAT CCGATCGCTG
CGCGAAGAAG GGCATTCCCT CGACAGCGCG GTCCGAGTTG GCGCCCTGAC GCGACTGCGT
CCGGTGCTGA TGACGGCCCT GGTGGCATCC CTGGGTTTCG TGCCGATGGC CATCGCCACC
GGTACGGGCG CTGAGGTGCA ACGTCCCCTC GCAACGGTGG TAATCGGTGG CATCTTGTCG
TCCACGGCGC TGACCCTACT GGTGTTGCCG GTGCTCTATC GACTTGCTCA CCGCAAGGAT
GAGGACGCGG AAGATACTCG CGAGCCAGTC ACTCAGACGC ATCAACCGGA TCAAGGCCGC
CAGCCTGCAT GA
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| Protein sequence | MFERIISFAI QQRWLVLLAV FGMAGLGIFS YNRLPIDAVP DITNVQVQVN TSAPGYSPLE
TEQRATYPIE VVMAGLPGLE QTRSLSRYGL SQVTVIFKDG TDVYFARQLV NQRIQEAKDN
LPEGVVPAMG PISTGLGEIY LWTVEAEEGA RKADGTAYTP TDLREIQDWV VRPQLRNVPG
VTEINTIGGF NKQYLVAPSL ERLASYGLTL TDVVNALNKN NDNVGAGYIE RRGEQYLVRA
PGQVASEDDI RNIIVGTAQG QPIRIRDIGD VEIGKELRTG AATENGKEVV LGTVFMLIGE
NSRAVSKAVD EKVASINRTM PEGVKIVTVY DRTRLVDKAI ATVKKNLLEG AVLVIVILFL
FLGNIRAALI TATIIPLAML FTFTGMVNYK ISANLMSLGA LDFGIIIDGA VVIVENCVRR
LAHAQEHHGR PLTRSERFHE VFAAAKEARR PLIFGQLIIM IVYLPIFALT GVEGKMFHPM
AFTVVLALLG AMILSVTFVP AAVALFIGER VAEKENRLML WAKRRYEPLL EKSLANTAVV
LTFAAVSIVL CVAIAARLGS EFIPNLNEGD IAIQALRIPG TSLSQSVEMQ KTIETTLKAK
FPEIERVFAR TGTAEIASDL MPPNISDGYI MLKPEKDWPE PKKTHAELLS AIQEEAGKIP
GNNYEFSQPI QLRFNELISG VRSDVAVKIF GDDNNVLSET AKKVSAVLQG IPGAQEVKVE
QTTGLPMLTV KIDREKAARY GLNMSDVQDA VATGVGGRDS GTFFQGDRRF DIVVRLPEAV
RGEVEALRRL PIPLPKGVDA RTTFIPLSEV ATLEMAPGPN QISRENGKRR IVISANVRGR
DIGSFVPEAE AAIQSQVKIP AGYWMTWGGT FEQLQSATTR LQVVVPVALL LVFVLLFAMF
NNIKDGLLVF TGIPFALTGG ILALWIRGIP MSITAAVGFI ALCGVAVLNG LVMLSFIRSL
REEGHSLDSA VRVGALTRLR PVLMTALVAS LGFVPMAIAT GTGAEVQRPL ATVVIGGILS
STALTLLVLP VLYRLAHRKD EDAEDTREPV TQTHQPDQGR QPA
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